Labeo rohita (rohu): 127168276
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Entry
127168276 CDS
T09007
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03008
Ribosome biogenesis in eukaryotes
lroh03013
Nucleocytoplasmic transport
lroh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127168276 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
127168276 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127168276 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127168276 (xpo1a)
03009 Ribosome biogenesis [BR:
lroh03009
]
127168276 (xpo1a)
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127168276 (xpo1a)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127168276 (xpo1a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127168276 (xpo1a)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
127168276 (xpo1a)
Pre-60S particles
127168276 (xpo1a)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127168276 (xpo1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127168276 (xpo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
DUF3385
BspA_v
Motif
Other DBs
NCBI-GeneID:
127168276
NCBI-ProteinID:
XP_050970949
LinkDB
All DBs
Position
1:15223208..15236865
Genome browser
AA seq
1071 aa
AA seq
DB search
MPADMTMLADHTARQLLDFSQKLDINLLDNVVNSMYYDVGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPNSV
EKEGVYIAKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFSLTMIQLKQMLPL
NTNIRLAYANGRDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSTSQHFDVPPRRHLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWRNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQERLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVRQLGSILKTNVRACKAVGHPFVLQLGRIYLDMLNV
YKCLSENISSAIQSNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LEAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITGEIPKIFDAVFECTLEMINKNFEE
YPEHRTHFFYLLQAVNSQCFPAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILFTM
LQNIAQEEGAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISI
TLNAGTTANNQGYVQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDSTDLFLEEREAALRQAQEEKHKLQMSVPGILNPHELPEEMCE
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagacatgaccatgttggcggatcacacagcacggcagttgctggacttcagt
caaaagcttgacatcaacctactggacaatgtcgttaactccatgtactatgatgtggga
tctcagcaaagagtggcacaagaagttctcaccaacttgaaggaccacccagatgcctgg
accagagtggacaccatattggagttctcacagaacatgaagacaaaatactatgctctt
cagatactggagaccgtgatcaaaacacgctggaagattcttccacggaaccagtgtgaa
ggaattaagaagtatgtcgtcgggctgattatcaagacttcctctgatcccaacagtgta
gagaaggaaggggtttacatagcaaagctcaacatgatcctggtgcagattctgaagcag
gagtggccgaagcactggcccacgttcatcagtgacattgtgggagcgagtcgcaccagc
gagagcctgtgtcagaacaacatgatcatcctgaagctcctcagtgaagaggtgtttgac
ttctccagcgggcagatgactcaggtcaaagccaaacacctgaaggacagtatgtgcaac
gaattttcccaaatattccagctgtgccagtttgtcatggaaaattcccagaatgcccct
ctggtccacgccaccttggagaccctccttcgcttcctgaactggattccgctgggctac
atatttgagaccaaactcatcagcacactggtgtacaagtttctgaacgttccaatgttc
aggaacgtcactctgaagtgtctgacggagattgcaggtgtcagtgtcagtcagtacgag
gagcagtttgtcaacttgttcagtctcaccatgatacaactcaaacagatgctgcctctg
aacacaaatatccgtctggcgtatgcgaatggaagagacgatgagcagaacttcatccag
aacctcagtctgtttctctgcaccttcctcaaagagcacggacagctgatagagaaaaga
ctcaacctcagagagacactcatggaggctctgcattacatgctgctggtgtctgaggtg
gaggaaacagagatctttaagatctgtttggagtactggaaccatctggctgctgagctc
tacagagaaagtcccttctccacctccacttccccattgctgtcaaccagccaacacttc
gatgtgccgccccgccgacacctctacctgcctgtgctctccaaggtgcgcctgctgatg
gtgagtcgcatggccaaaccggaggaggttctggtggtggagaacgatcagggcgaggtt
gtgagagaattcatgaaggacaccgactccatcaacctctacaagaacatgagagagact
ctggtctacttgactcatttggactatgccgatacggagcgcatcatgaccgagaagctt
cataatcaggtgaatggtaccgagtggtcctggaggaacctgaacacgctgtgctgggcc
atcggctccatcagtggtgccatgcatgaagaggatgagaagagattcctcgtcacagtc
attaaggacctactgggtctgtgtgaacagaaaagagggaaagacaacaaggccatcatc
gcctctaacatcatgtacatcgtaggccagtacccacgattcctgagggctcactggaag
ttcctcaagactgtcgttaacaagctcttcgagttcatgcatgagacccatgatggtgtg
caggacatggcgtgtgacaccttcatcaagattgctcagaagtgcaggaggcattttgtg
caggttcaggttggggaggtgatgcccttcatcgatgagatcctcaacaacatcaacacc
atcatctgtgacctgcagccacagcaagtgcacacgttctacgaggccgtgggctacatg
atcggagcacagacggatcaggctgtccaggagcgcctgattgagaaatacatgctcctt
cccaaccaggtgtgggacagcatcatccagcaggccaccaagaacgtggacatcctgaag
gacccagagacagtgcgtcagctaggcagcatcctgaagactaatgtgagggcgtgtaaa
gctgtgggtcaccccttcgttctgcagctgggccgcatttacctggacatgctcaacgtc
tacaagtgcctgagcgagaacatctcttctgccatccagagcaacggtgagatggtgacc
aagcagccgctgatacggagcatgcggacggtaaaaagagagacgctgaagctcatctcc
ggatgggtcagccgctccaacgacccacagatggttggagagaactttgttccacctttg
ctggaggcggttctcatcgactaccaaaggaatgttccagcagctcgagaaccagaggtg
ctcagcactatggcaaccatcgtcaacaagcttggcgctcatataacaggagagatcccc
aagatattcgatgctgtgtttgagtgcacgctcgaaatgatcaacaagaactttgaggaa
tacccagagcacaggacacatttcttctatctgctgcaagctgtcaactcccagtgtttc
ccagcattcctgtccatcccaccagcacagttcaaactggttttggactccatcatctgg
gccttcaaacacaccatgaggaatgtggctgacacagggcttcagatcctgttcacgatg
ctgcaaaacatcgcacaggaagagggagcagctcagagcttttatcagacctacttctgc
gacatcctgcagcacattttctcggttgtcacggatacgtctcatactgctggtctgacg
atgcacgcctccatcctcgcctacatgtttaacctggtggaagagggtaaaatcagcatc
actctgaatgcaggcaccacggccaacaatcaaggatatgtgcaggagtatgtggccaat
ctgctgaagacggccttcccacatctgcaagatgcccaggtgaaggtgtttgtcacaggt
ctgttcagcttgaatcaggatattcctgcctttaaagagcacctcagggacttcctggtc
caaatcaaggagtttgcgggtgaggactccacagatctgttcctggaggagagggaagcg
gctctgcgtcaggctcaggaggagaaacacaagctccagatgtctgtcccaggaatcctc
aaccctcacgagctcccggaggaaatgtgtgaatga
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