Labeo rohita (rohu): 127169420
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Entry
127169420 CDS
T09007
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127169420 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127169420 (smyd1b)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127169420 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
127169420 (smyd1b)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127169420 (smyd1b)
BRITE hierarchy
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Gene cluster
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Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
127169420
NCBI-ProteinID:
XP_050972736
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Position
8:complement(31257688..31276274)
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AA seq
517 aa
AA seq
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MVQLEASAILVSAGESQLPYRSSLASVKTTDMEFVEVFDSPGKGRGLRAIKEVWAGDVLF
AEPPFASVVFDSHAANICHSCFRRQEKLQRCGQCRFAHYCDKTCQRAAWEEHKQECAAIK
SYTKAPNESVRLAARILWRMDKEGSVVSDTQLTTLEELEDHIYDISEEDAKDFKVDIHNF
LDYWPRSSKPHTVDNVSHILGVINCNGFMVSDQRGLQAVGVGLFPNLCLVNHDCWPNCTV
ILNNGNQSAVDTMYHSQTRIELRALGKINPGEEVTVSYVDFLNLSEDRRRLLKQQYFFDC
TCEHCTNKIKDDLKMAGAEVDGVKVPEEKVKEITEYSRTMLEKMEKARIEANYNEVVKIC
RECVEKQENVLADTHIYQLRMWCTLSEVLSYLQFFEEASTYARKMVEGYMKLYHPNNAQL
GMATMRAGVTHWQAGFIEIAHGMICKAYAILMITHGPAHPITKDLEAMRMQTEMELRMFK
QNEYVYHSMREAALKNQPMRMMAEPATDSIKNLFRRK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggtacagctggaggcttcggctattttagtaagtgctggtgaatcccagctgccatac
agaagctcattggcatcagtgaagacgacagacatggagtttgtggaagtgtttgactct
ccagggaaaggcagaggtctgcgggccatcaaagaggtctgggctggagacgttttgttc
gctgaaccacctttcgcttcagttgtctttgacagtcacgccgccaacatctgtcacagc
tgcttccggcggcaggagaagctgcagcgctgcggtcagtgcaggtttgcacattactgc
gataaaacgtgtcagcgcgctgcctgggaagagcacaagcaggagtgtgcagccatcaag
agctacaccaaagcacccaatgaaagcgtccgtctcgccgctcgtattttgtggcgtatg
gataaggagggaagcgtggtctccgacacgcagctgaccaccctggaggagctggaggac
cacatctacgacatctctgaagaagacgccaaggacttcaaagtcgacatacacaacttt
ctagactactggccccgttcgagcaaaccgcacacggtggacaacgtctcccacatcctt
ggagtgatcaactgtaacgggttcatggtgagcgatcagcgaggtctgcaggccgtcggc
gtcggtttgttcccaaatttgtgtctggtgaatcacgactgctggcccaactgcaccgtc
atactcaacaacggcaatcagtcggctgtcgatactatgtatcactctcagacgagaatt
gagctgcgagctctgggaaagatcaaccccggagaagaagtgactgtgtcgtacgtggat
tttctgaacctgtctgaagatcgcaggcgtttgctgaagcagcagtatttcttcgactgc
acctgcgagcactgcaccaacaaaatcaaagacgacctcaagatggccggagcagaggtg
gatggagtgaaggtgccagaagaaaaggtgaaagaaatcacagaatacagccggacgatg
ctggaaaagatggagaaggcccggatagaagccaattacaacgaggtggtgaagatctgc
cgcgagtgtgtggagaagcaggagaacgttctggccgacacacacatctatcagctacgc
atgtggtgcacgctcagcgaggtgctctcatacctgcagttcttcgaggaggcgtcgact
tacgcccgtaaaatggtggagggatacatgaaactgtaccatcccaataacgctcagctg
ggaatggccacgatgagggccggcgtgacgcactggcaggccggattcatagagatcgct
cacggcatgatctgcaaggcctacgccatcctgatgatcacacacggcccagcacacccc
atcaccaaagacctggaggccatgcgcatgcagacagagatggagctgcgcatgttcaaa
cagaacgagtacgtctatcactccatgcgtgaggcggcactcaagaaccagcccatgagg
atgatggcagaaccggccaccgacagcatcaagaacctgttccgcaggaagtga
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