Labeo rohita (rohu): 127169980
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Entry
127169980 CDS
T09007
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127169980 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127169980 (prdm6)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127169980 (prdm6)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
127169980 (prdm6)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
127169980 (prdm6)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127169980 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
127169980
NCBI-ProteinID:
XP_050973660
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All DBs
Position
8:30895058..30932601
Genome browser
AA seq
562 aa
AA seq
DB search
MKVHHHHPSSVLLLQSDMLKPGEPSGSAFLKVDPTYIQHWQQLFPQNNALKAASLPPPVP
LENLRLQRPNLISCTSSSSSSSSSTASPACQIALFGQTLSSDSTSGGSGGSSQAKELSLS
SNFKNDKGSRLKLSSEELDYYLYGQQRMEIIPLNNHNGDLNNRCDMCADNRNGECPMHGP
LHSLRRLVGTSSASVTVPPPEVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIG
PFQGVPLPLEKVQSGSVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCGEQ
NMMVVQYRSCIFYRACADIPRGTELLVWYNDSYTSFFGIPLQCVAQDENLNVPSTVMEAM
TRQDSLQPFSKSPKSSPSSLLLPRSMVFPQSPHSRSFSLLDKSGHAESSLNQMSCKNQRV
LASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQP
SELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLS
RHQRMPNECKPISESSESIEVD
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccatcatcatcatccatcatctgtgctgctgttacagtcggacatgctgaag
ccgggcgagccgagcggttctgctttcctcaaagtggacccgacctacatccagcactgg
cagcagctcttcccccagaacaacgcgctgaaagccgcctctctgccgcctccggtgccg
ctggagaacctccgcctgcagagacccaacctgatctcctgcacctcctcgtcctcgagt
tcgagctcctctaccgcgtcccccgcgtgtcagatcgcgctgttcggacagactctgagc
tccgacagcaccagcggaggaagcggcggatcttctcaagccaaagaactttctttgtcg
tccaactttaagaatgataaaggatcgcggctgaagctgagctccgaggagctggactac
tacctgtacggacagcagcgcatggagatcatcccgctcaacaaccacaacggagacctc
aacaaccgctgtgacatgtgtgcagacaaccgtaacggcgagtgccccatgcacggaccc
ctgcactcgctccggaggctggtggggaccagcagcgcctcggtcaccgttcctcctcca
gaggtcccggactggctgagggatttgccccgtgaggtgtgtctgtgcaccagcaccgtc
ccgggtctgggatacggcatctgcgctgcccagcgcatcccgcagggcacctggatcgga
cccttccagggcgtcccgctgccgctggagaaggtgcagtcaggatccgtgcgaaacaca
agacacttatgggagatttacgatcaggagggaaccttacagcactttattgacgggaat
gagcccagtaagtcgagctggatgaggtacatccgctgcgccagacactgtggagagcag
aacatgatggtggtgcagtacaggtcgtgtatcttctaccgggcgtgtgcagatattcct
cgaggaactgagctcctggtttggtacaacgacagctacacgtctttcttcgggatcccg
ctgcagtgcgttgcacaagacgaaaacttgaacgtgccgtctactgtcatggaggccatg
acgcgtcaggactccctccaacccttcagcaagagccccaaatcgtcgccgtcgtcgctg
ctcctgccgcgctccatggtgttcccacagtcaccccactctcggagcttctctctgctg
gataagagcggccacgccgagtccagtctgaaccagatgagctgtaagaaccagcgcgtg
ctggccagccccacgtctaccagtcagctgagctccgagttcagcgactggcacctgtgg
aagtgtggccagtgcttcaagaccttcacacagaggatcctgctgcagatgcacgtgtgc
acgcagaaccccgacagaccgtatcagtgcggccactgttcgcagtcgttctcgcagccg
tcggagctgcgcaatcacgtggtcacgcactccagcgaccggcccttcaagtgcggctac
tgcggacgagcctttgccggcgccaccaccctcaacaaccacatccgcacgcacacgggg
gagaagcctttcaagtgcgagcggtgcgagcgcagcttcacgcaggccactcagcttagc
cgacaccagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatcaatcgag
gtggattaa
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integrated database retrieval system
