Labeo rohita (rohu): 127170179
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Entry
127170179 CDS
T09007
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00531
Glycosaminoglycan degradation
lroh01100
Metabolic pathways
lroh04142
Lysosome
Module
lroh_M00076
Dermatan sulfate degradation
lroh_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
127170179 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127170179 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lroh02042
]
127170179 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127170179 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127170179 (si:dkey-72l14.3)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
127170179 (si:dkey-72l14.3)
Bacterial toxins [BR:
lroh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
127170179 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Enzymes
127170179 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Enzymes
127170179 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
127170179
NCBI-ProteinID:
XP_050973950
LinkDB
All DBs
Position
8:19321896..19328471
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AA seq
496 aa
AA seq
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MAGRKHTFIFLSLFLLFFLCLFTHPCVCGPARAPLLAGQPFLVLWGVPDKDCLGRPDPAA
YGMEWEGRVAIFYEDTLGLYPYFTVQERPVNGGLPQHTSLDLHLQRVEGDLMASLPQAGA
PGLGVLRWQEWAPQWNRNRRIKTKYLVESRALLRRFFPDWSTEEVEKWSQVDFEAAAQSI
MMETLREVKRLRPQRLWGMAPFPNCYNFDSTQIALANYTGRCPAAEMALNDELMWLWKRS
GALYPALSMEKLPEGTKGAWLYATNQIREALRVAALAGTTFDLPVFPLIKIVYTSSSSFL
SEIDLVNTIGESAAMGASGVIIWEKSLAVKTQKSCSEFGSYVRQVLGPYAVNVTTAARLC
GVSLCQGRGRCVRKKPEDPTYLHLPSAHFMLLPNGAEGVRATGQLPTAYIDLWKKDFRCQ
WFEALEGAAADQESGVVLENRGKITSPTVKTLLGISQSQGTVVSVAVVPTKQPVDGGNSA
LYTPIILLSSLVLHYV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctggaagaaaacacacgttcatcttcctctccctttttcttctgttcttcctctgt
ctcttcactcatccatgtgtttgcggtcctgcccgggcccctcttctcgccggccagccg
ttcctggtgctatggggggttccggataaagactgtttgggtcggccagacccagctgca
tatgggatggagtgggaaggccgtgtggcaatattttatgaggacacactaggactttac
ccatatttcactgtacaggaacgccctgtcaacggtggcctaccgcaacataccagcctt
gaccttcacctccagagggtggagggcgacctgatggcctcattaccccaagcaggagcg
cctggattaggggtgctgcgctggcaggagtgggcgcctcagtggaacaggaacaggcga
attaaaacaaagtacctggtggagtcgagagcactcctccggagattttttccagactgg
agcacagaggaagtggagaaatggtctcaggttgactttgaagcagccgcacagtctata
atgatggaaaccctgcgggaggtgaagagactccgcccacagagattatggggcatggcc
ccatttcctaactgctataactttgactccacccagatagcattagccaattatacagga
cggtgccctgcggcagaaatggcgcttaatgatgagctgatgtggctgtggaagcgtagc
ggtgccctttacccagctctctcaatggagaagctgccagagggaactaaaggggcgtgg
ctttacgcaaccaatcagatcagagaggctttaagagtggcggctcttgcagggactact
tttgatcttcctgtgtttccgttgatcaagattgtgtacacatcttctagttcctttctc
tcagagattgatctggtgaacacaattggagagagtgctgcgatgggagcatctggagtc
attatctgggaaaaatccttggcagttaaaacacagaaatcctgctcagagtttggctcg
tacgttcgtcaggttcttggtccatatgctgtcaacgtgaccactgcagcacgtctctgt
ggagtctcattgtgtcagggccgtggacgctgtgtgcgtaagaaacctgaggatcccaca
tacctgcatcttccttcagcccactttatgcttctcccaaatggggcagaaggtgtccgg
gccacgggacagctccctaccgcttatatagatctctggaagaaggacttccgctgccaa
tggttcgaagccttggagggtgcagcagcggatcaagaatcaggtgtagtgctggaaaac
cgagggaaaataacatcaccaacagtaaaaacactgcttgggataagccagagtcagggt
acagtggtttcagtggcagtagtgcctaccaagcagccagtggatggcggaaactctgca
ctttatacacccatcatccttctctcctcactggttcttcattatgtttga
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