Labeo rohita (rohu): 127170786
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Entry
127170786 CDS
T09007
Symbol
zmp:0000001082
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-D
KO
K05718
integrin alpha L
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127170786 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127170786 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170786 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
lroh04515
]
127170786 (zmp:0000001082)
04090 CD molecules [BR:
lroh04090
]
127170786 (zmp:0000001082)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170786 (zmp:0000001082)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127170786 (zmp:0000001082)
CD molecules [BR:
lroh04090
]
Proteins
127170786 (zmp:0000001082)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
ITGAX-like_Ig_3
VWA_3
FG-GAP_3
Urb2
Motif
Other DBs
NCBI-GeneID:
127170786
NCBI-ProteinID:
XP_050974997
LinkDB
All DBs
Position
1:145496..171930
Genome browser
AA seq
1206 aa
AA seq
DB search
MNRKMFVTQTSSSRMETLGLILFMWVSLSGAFNVDTEHPLRFNSTPDDFFGYSVYQTEFG
NRKQIIVGAPLQGNSTGQIYSCTADLQSCEQLQSPGSESARFFGMSAAVSSAAVTSCSPY
VPHECDGNSYLNGVCYQFNSSSQAVSNFTAAYQECTKREVNLVFLFDGSSSMKAHEFQMN
KDFIKNIMKTLSNSSIKFAAVQFSSDIRTVFDFNDYQNGFAEEKLKNEAHMKSLTNTYRA
INYVLNNLLNNVLSGANPSAVKALVIITDGEPSDNDNRNVLKTCDEQNILRYVIGVGKVT
LATVTQLASAPKDNNTFYIQQYSGLQGLLDNLQKKIYNIEGSKEAHGRDRQRELSQSGFS
VISSQEDSVIVGSVGSNDWRGALYEVTGSGSEFRETEITDPAVSRDSYMGYSTVLGTRGG
VPHLFSGAPRAEHTGLVTLFTKNKNTWTVTRNIKGEQIGSYFGASLSLLDVDSDGDSDFL
LVGAPLFYQSQPRTEGRLYVYAFSEQNFQKMLNVSESTTGRFAASLASLKDLNGDSLSDV
AVGAPLEDEGVVYIYLGDRTLGINPKHAPQRIPARSVLSGLQQFGVSLSGQMDMNDDNLT
DIVIGAQGGIVLLKARPVMSVSAQLSFSPKEISLNYFECPGDSAFNAFNLSSCFTVTERT
GSTGSLEKKLNVSLNLNVDVVRGMSRGFFDQKDSSSRTLQQSVLLDPGFSCFPFSIFMLR
CVADTVLPLKIQINFSQSEMSFGCSXQNSSKFLSLQVSVTCKSSVEVSLFCDXVPFQRNC
NSNSSCVADLKLNFSFTNDTLVVENQAHFTVLVTLANPGDDSYNTSIVLHYPEGLSLSKF
EPIESSRTRSSCGDGDGGATNRTTCRINQPVYRSNTTTQFLGTFRVTIWDRDWSDRMEMM
IIAGSDNNRNTTDSAVRRSVPVQFSVDLAISLEAENSVTYLNFSVEDKAPKPLDITYKVE
NLRGKGLPVSVTFTLPCQTAPVILTHHSISVHEVHHSSISSYHQIIMCLLNKQLLFFSPE
QNVVXLQARTTGRSLWEVXVSSVXSAENFSSLLNLTAQAALHNMTEYEHINPFKEIRSDY
VFNISAELHYNTSRYNQTLTGLKEDPHRSQTAVKVEVVDPPSRMLIVSIGAVGGFILLII
IFLLLLRLNRPSQNGTHRIVGYLRQQRIHLCRLQNSIRKRQEVKPNLQSDDAFLPWNAAS
ETNWLN
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagatgtttgtcacacagacgagcagcagcaggatggagacgctcggcttg
attctcttcatgtgggtgtctctttcaggggccttcaacgtcgacactgaacatccactg
agatttaacagcacaccagacgatttctttggttacagcgtttatcagactgagtttgga
aacaggaaacagatcattgttggagctccattacaaggaaattcaacaggacaaatttac
agctgcaccgcagatctgcagtcctgcgaacagctgcagtcgccaggttcagagagcgcc
cgtttcttcggcatgtctgctgctgtgtcgtctgctgctgtgactagctgcagtccgtat
gttcctcacgagtgtgatggaaactcgtatctgaacggcgtttgctaccagttcaacagc
agctcacaggccgtctcaaactttactgccgcttaccaagaatgcaccaagagagaggtc
aatctggtgtttctctttgatggatccagcagtatgaaagcacatgagtttcaaatgaac
aaagacttcattaaaaatattatgaaaacactttcaaactcatccataaagtttgctgct
gtccagttttcatcagacatacgaactgtgtttgatttcaacgattatcagaacggcttc
gctgaagagaaactcaagaacgaggcgcacatgaaatctctcacaaacacatatcgtgca
atcaactacgttctaaataatctgctgaataacgtgttgtctggagccaatcccagcgct
gtgaaagctctggtgatcatcacagatggagaacccagtgataatgataatagaaatgtc
ctcaaaacatgtgatgagcaaaatatcctgcgttacgtcattggggtgggaaaggttacg
ttagccacagtcactcaactggcatcagcaccgaaagacaacaacaccttctacattcaa
cagtacagtggactccagggacttcttgacaacctgcaaaaaaagatctacaatattgaa
gggtcaaaggaagctcacggcagagacagacagagagagttatcacagagtggattcagt
gtcatctcatctcaggaggactctgtgatcgtgggttcggttggatctaatgactggcgt
ggagctctgtatgaagtgacgggatcaggatctgaattcagggagacagagatcaccgat
ccagctgtcagtagagactcgtacatgggttactcgactgtgctgggaacgagaggcggc
gtccctcatctgttctctggggcgccgcgggccgagcacacgggtctggtgaccctcttc
accaagaataaaaacacatggacagtgacgaggaacatcaaaggagaacaaattggctca
tatttcggagcgtctctgagtctgttggatgtggactctgatggagactcagatttcctt
ctggtcggagctccattattttaccagtctcagccgaggactgaaggaaggctgtacgtc
tacgctttctcagagcagaattttcagaaaatgctgaatgtgagcgaatcaaccaccggc
agatttgctgcatctttggcttcactaaaggacctgaatggagacagtctgtcagatgtg
gcggttggggcgccgctggaggatgaaggagtcgtctacatctacctgggcgacaggacg
cttggcataaaccctaaacacgctcctcagcggatcccagcgcggtcggttctgtctggt
ctgcagcagttcggggtgtctctgtccggtcagatggacatgaacgatgataatctgaca
gacatcgtgatcggagcacaaggagggattgtcctgctcaaggctcggcctgtgatgtct
gtgtctgcacagctcagctttagtccaaaggaaatcagcttgaactactttgaatgtccg
ggtgacagcgcatttaatgcatttaatctgtcttcgtgtttcacggtgaccgagaggacc
ggcagcaccggatctctggagaagaagctgaatgtttctctgaacctgaatgtggatgtg
gtgcgaggaatgagtcgaggattctttgatcagaaggattcgtcgtccaggactctgcag
cagtccgtcctgctggatcctggattttcctgtttccccttctccatcttcatgctgcgc
tgcgttgcagacacagtgttgcctctgaagatacaaattaatttctcacaatctgagatg
tcttttggctgttcttgacaaaactcttcaaaatttttgtctcttcaagtttctgtgaca
tgcaaaagctctgtagaagtttctcttttctgtgactaggtcccgtttcaaaggaactgt
aattcaaacagcagctgtgtggccgatctgaagctgaacttcagttttacgaacgacaca
ctagtggtggagaatcaagctcatttcaccgtcctcgtaacactggcaaacccaggcgac
gactcctacaacaccagcatagtgctgcattacccagaaggcctctcgctctctaaattt
gagcccattgagtcgagccggactcgaagcagctgtggtgatggggacggcggcgctacg
aacagaacaacctgcagaatcaatcaaccggtgtaccgcagcaacaccacaactcagttt
ctgggaacgttccgtgtgacgatatgggatcgtgactggtctgaccgaatggagatgatg
atcattgccggcagtgataacaatagaaacacgactgattcagcggtgaggaggagcgtc
ccggtgcagttctccgttgatctggcgatcagtctagaggctgaaaactctgtgacgtat
ctgaacttctctgtggaggacaaagctccaaaacctctcgacatcacctacaaggtggag
aatctgcgtggtaaaggtctgccggtgtcggtcacgttcacactgccctgtcaaactgca
cctgtgattttaacacatcacagcatcagcgtacatgaggtgcatcactcgtccatcagc
tcataccatcaaatcatcatgtgtttgctgaataaacaacttctgttcttctctccagaa
caaaacgttgtgtgacttcaagccagaacaacaggacggtcactgtgggaagtttgagtg
tcgtcagtttaatctgcagaaaacttcagcagtttacttaacctgacagcgcaggcagct
ctccataacatgacggaatatgagcatataaatcccttcaaagagatcaggagtgattac
gtgttcaacatcagcgctgagctccactacaacacaagccgctacaaccagactttaacc
gggctgaaggaggatccccacagatcccagacggcagtgaaggtggaggttgtcgatcct
cccagtcgaatgctgattgtcagcattggtgcagtgggcggattcatcttgctcattatc
atattcctcctcctgctgaggctcaaccgtccgtcacagaatggaactcacagaattgtg
ggatatctaaggcagcaaaggatacatctatgccgccttcaaaattcgatcaggaaaaga
caagaagtgaaaccgaatttgcaatcggacgatgccttcctgccttggaatgccgcctct
gaaactaactggttaaactaa
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integrated database retrieval system
