Labeo rohita (rohu): 127170798
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Entry
127170798 CDS
T09007
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00052
Galactose metabolism
lroh00511
Other glycan degradation
lroh00531
Glycosaminoglycan degradation
lroh00600
Sphingolipid metabolism
lroh00604
Glycosphingolipid biosynthesis - ganglio series
lroh01100
Metabolic pathways
lroh04142
Lysosome
Module
lroh_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
127170798 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
127170798 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
127170798 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
127170798 (glb1)
00511 Other glycan degradation
127170798 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127170798 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170798 (glb1)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
127170798 (glb1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127170798 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
127170798
NCBI-ProteinID:
XP_050975012
LinkDB
All DBs
Position
1:complement(16023084..16031327)
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AA seq
659 aa
AA seq
DB search
MAPGVGLMSVLLLTLPLVTYAATPSFSIDYRQNCFLKDGEPFRYISGSIHYSRIPRVYWK
DRLLKMYMAGLNAIQTYVPWNFHEPVPGQYDFSGDRDLEHFLQLCQDIGLLVIMRPGPYI
CAEWDMGGLPSWLLRKKDIVLRSSDPDYIAAVDKWMGKLLPIINHYLYQNGGPIITVQVE
NEYGSYFACDYNYMRHLSQLFRSYLGEEVVLFTTDGAGVGYLKCGSLQGIYATVDFGPGS
NVTAAFAAQRHAEPRGPLVNSEFYTGWLDHWGKKHSVIPTAAVVKSLNEILQVGANVNLY
MFIGGTNFGYWNGANSPYGPQPTSYDYDASLTEAGDLTKKYFAIREVISMYKEIPEGILP
PSTPKFAYGQVQMKKLKTVSESLDLISVSGPVKTLYPPTFTEMNQGFGFVLYQTVLPFNC
LKPTPLSSPLNGVHDRAYISIDGIAAGILERNKALTINITGKAGSRVDILVENMGRINYG
KEINDFKGLVFNLTLGADFLSNWTVYSLNIDEAVQQGLLSASSRFISTSSRFATSPPTVL
SPPTFYAGSFIIPNGIPDLPQDTYIQFPNWRKGQVWINGFNVGRYWPSRGPQVTLFVPAH
LLSTSVQNNITVLELEASPCSSGSCTVEFTDTPIINATVKSTGLYKRGPADFWSRTILD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctggtgtcggactgatgtcggttctcctgctgacacttccattggtcacgtat
gctgcaacacccagtttctccattgattaccgtcaaaactgcttccttaaagatggagag
ccatttcgctacatctccggcagcatccactacagcaggattcccagagtctactggaag
gacaggctactcaagatgtacatggctggtttgaacgccatccagacgtatgtgccatgg
aacttccacgagccggtgcctggtcagtatgacttcagtggggatcgggatctagagcac
ttcctacagctgtgccaagacatcggcctgctagttataatgagaccaggtccctacatc
tgtgcagaatgggatatgggaggtttgccttcctggctgttgagaaagaaagatattgtc
ctgcgatcatctgatccagattacattgcagctgtggataagtggatggggaagttgttg
cccatcataaaccattacttgtaccagaacggtggacccatcattactgtgcaagtagag
aatgaatacggcagttactttgcctgtgattataactatatgcggcatctcagccagctg
tttcgctcttatctgggtgaagaggtggtcctgttcaccacagatggagcgggtgtgggt
tatctcaagtgtggatccctccagggcatctatgccactgttgacttcggaccaggttca
aacgtgactgctgcttttgcagcacagagacatgcagagccacgtggtcctttggtgaat
tctgagttctacacaggctggttggatcactggggcaagaaacactctgtcattcccaca
gctgctgtggtcaagagccttaatgaaattctgcaagtgggagccaatgttaacttatat
atgttcatcggtggaactaactttggctattggaatggtgccaattctccttatggtcct
caaccaaccagctatgactatgacgcctcgcttacagaagctggagacctgacaaagaag
tatttcgccataagagaagtcatcagcatgtacaaagagataccagaaggaatactgcct
ccatcaacacctaaatttgcttatgggcaagtgcaaatgaaaaagctcaagaccgtgtct
gagtctttagatttaatatctgtctctggccctgtaaaaactctttacccaccaacattt
actgaaatgaatcaggggtttggctttgtgctgtatcaaactgtgttacccttcaactgt
ttgaagcccaccccgctgtcgtctccactaaatggagtccatgatcgggcatatatatcc
attgatggtattgctgctggtattttggagaggaacaaggcactcaccatcaatataaca
ggaaaagctggcagccgtgtggacatcctggtggagaacatgggcagaatcaactacggc
aaagaaattaatgattttaagggcctggtgtttaatctgactctgggtgctgattttctg
agtaattggacggtgtactctctgaacatcgatgaagcagtgcagcagggcctgttgtcg
gcatcgagcagattcatctccacctccagcaggttcgccacctctcctcctactgtgctt
tcacctccaaccttctacgctggcagcttcatcatccctaacggcattcctgacctccct
caggacacatacatccagtttcccaactggaggaagggtcaagtgtggattaacggtttt
aatgtgggccgctactggccgtcccgtgggccacaggtgaccctctttgtcccagcccac
ctgctcagcacctccgtccaaaacaacataactgttctggagttggaggcgtcaccttgc
tcctctggttcctgcacggtggagttcactgatactcccatcataaacgccacagtgaag
tcaaccggcctctacaagagaggtccagcagacttttggagtagaacgatattagattaa
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