Labeo rohita (rohu): 127171793
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Entry
127171793 CDS
T09007
Symbol
apc
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04310
Wnt signaling pathway
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127171793 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127171793 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127171793 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127171793 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127171793 (apc)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127171793 (apc)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
127171793 (apc)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
127171793 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
APC_r
EB1_binding
APC_u5
APC_rep
APC_u14
APC_u9
APC_N_CC
SAMP
Arm
APC_15aa
Suppressor_APC
APC_u15
APC_u13
Sec7-like_HUS
HMMR_C
Motif
Other DBs
NCBI-GeneID:
127171793
NCBI-ProteinID:
XP_050976626
LinkDB
All DBs
Position
10:26416946..26466518
Genome browser
AA seq
2756 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEEDSK
DSQGQIDFLERIKEMSLDPNSFSGVKLRSKASLPGSGSAHSADSSPSPSPMSSFPRRGVT
GGGRDSAGYLEELEKERSLLMAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSLQTDM
TRRQLEYEARQIRAAMEEQLGTCQDMEKRAQGRVARIQQIEKDMLRIRTRLQAQSADAEV
KHDPVTQTEGAHAAGDAGGGNAACSQGSSSRVDHDAASEMSSAGSYSVPRRLTSHLGTKV
EMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSVLLGN
SRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEWQESHERGVD
QDKNPMPSPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIGELLQVDCEIYGLTNDH
YSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLRNLS
WRADVNSKKILREVGSVRALMECALEVQKESTLKSVLSALWNLSAHCTENKADICTVPGA
LAFLVSTLTYRSQTNTLAIIESGGGILRNVSSLIATNEEHRQILRENSCLQTLLQHLKSH
SLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMAN
RPAKYKDANIMSPGSSLPSLHVRKQKALIEELDAQHLSETFDNIDNLSPKASHRAKPRHK
HNVYGDYDGVCRSDGYNPNGVSVRSPYMNTPVLSSPSSRDNRGNGESVRAERDRSLDRER
RGFHSDAEAPKRMVQIPTTAAQIAVVMEEVQSMHLSMDDRTAGSTPDPHAVQDDMIRRQT
AVHGHQNMYSYSKTDPSGRPCPMPKLEYRASNDSLNSVNSTDGYGKRGQMKPSVDSYSED
DEGKCCVYRKYPADLAHKIHNANHMEDDNGDLDTPINYSLKYSDEQLNSGRQSPSQNERW
ARPKLLDDEMKRPDQKPQRSQSPGYPMYTEASSEGEDKLKKYQPRFVQQDLPGFRARGSN
EQINSGSSHGLNKKISQTICAVDDYADDKPTNYSERYSEEEQLDEQTPNYGMKYNEDHHV
EQPIDYSLKYSDASSKKAMFSHSKPSSTQGSVKDHLSQDSSSSVASLKNQGRQKQLHPSS
AQNRAGPTRAVQKNPACKAPTINQETLQTYCVEDTPICFSRGSSLSSLSSEEDEMESCKR
NVNSANNYPTLPISEKESTSNIASDQRTNESQSSGHYVRIKPPRHHLGHGDASRHHKTVE
FSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESHSIASSVQSEPCSGM
VSGIISPSDLPDSPGQTMPPSRSKTPPPPPPRSTSVKQKVTMPPHSEKRDLAPRHAVVSA
AVQKVQVLPDNDTLLHFATESTPDGFSCASSLSALSLDEPYIQKDVELKIMPPVHEDDHS
NEAELENEDIQEPKVQEKPSSTAEPGKDILDDSDDDDDIEILEACINSAMPTKSSRKPKK
QSPSSTSRIPPPVARKPSQLPVYKLLPPQNRGQQQKHVALTHCEDMPRVYCVEGTPVNFS
TATSLSDLTIDSPPNELAGIEGSAPHPEASGQRRDTLPEGKSAEAKDTGLSPPMQSALAE
NEGDDILAECINSAMPKGKIHKPFRVQKMPEQAQHPSTATGNLVQQDLEKKKPTSPVKPM
PQSSEYRARMLKRPEAPSSLSETASYPDKNKETEKQEPKVVIREFADKAPNAEVRTRPGF
AFDSPHHYTPIEGTPYCFSRNDSLSSLDFEDDDLDLSKEKAELRKDKEQRKVPPLKCNVE
QSVNTNRVAAFQAAPTKPLQKQGGFQQAPKENTVAVCDEKQKFSIEDTPVCFSRNSSLSS
LSDIDQENNNKDCSHKDDATQMEVPRPQASGYAPKAFHVEDTPVCFSRNSSLSSLSIDSE
DDLLQECISSAMPKKKKQAPRSKTEEPGAKEEKSVLADGILAEEPDLILDLTDTHSPISE
QALSPDSESFDWKAIQEGANSIVSSLHQAAASLSRQGSSDSDSILSLKSGISIGSPFHLP
LNQEDNKPATNKGPRILKPGEKSTLESKKKEEETKSLKGGKKVYKSLITGKPRPSLESMS
SQHKQAQAPVISRGRTMIHVPGVRSSSPSTSPVPKKPPPRGQISKPPSQAPGPGNSPRTM
KMPAGSEPSPARDPASSQGGSSKTSSRSGSRDSTPSRPVQQSLTRPMQSPGRASVSPGRN
GLSPSNKLSQLPRTASPSAASTKSSGSGRMAYTSPGRQLGQQTPTKQSGLPRSTSGIPRS
ESASKSLNQCGASGSSKKAELSRMSSTKSSGSESDRSEKPGLVRQSTFIKEAPSPTLKRK
LEESASFESLSPSSPSQSQTPVSSPSLPDMSLSLPYQGSGWRKSPHGQNSSENGDGKSLR
RHDISRSHSESPSRLPINRTGTWKREHSKHSSSLPRVGTWKRTGSSSSILSASSESSEKG
RSEDERQPTPKSGGLERKGTWRKIKESESSYAPSMTLDLPDPNGDAAHSMGAAMSKTEDV
WVRIEDCPINNPRSSKSPTANTPPVIDSQSSKGLPCDRDSSESHSKQPLASENAAVGHLG
SETNLNLLRSSESLDKKVADIKPAPSNPNTGTEVHEFPVAERTPFSSTNSSKHSSPSGAV
AARVSPFNYTPSPRKSSADNTTPRPSQIPTPITSNAKKRDTKGDTTESGSYIVTSV
NT seq
8271 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcatcttatgatcagctgctgaagcaagtggaggcattgaaaatggagaac
tccaacctgagacaagagctcgaggacaactccaaccacctcaccaaactggagacggag
gcgtctaatatgaaggaggttttgaagcagctacaaggaagtattgaagaggactccaaa
gattcgcaaggccagattgactttttggaaagaattaaagaaatgagtcttgacccaaac
agtttctctggcgtgaagttgaggtccaaggcatctctgccgggctccggttcggcccac
tcggccgacagcagccccagtcccagccctatgagctccttccccaggagaggggtgacc
ggcgggggtcgagacagcgctgggtacctggaggagctggaaaaggaacggtctttgttg
atggcagaacttgagaaggaagaaaaggagaaagactggtattatgctcaattacaaaac
ctcacaaaaagaattgacagtctgccgctgactgagaatttttctctgcagactgatatg
acacgcaggcaactagaatacgaagcccggcagatcagagccgccatggaggagcagctg
ggcacgtgtcaagacatggaaaaacgggcgcagggccgcgtagctcggatacagcagata
gaaaaagacatgctgaggattcggacacgtttacaggcccagtcagcagacgcggaggtc
aagcatgaccccgtgacgcagaccgaaggcgctcacgcggcaggagatgctggcggtggt
aatgcggcctgctcacagggctcaagttctcgggtcgatcatgacgcggccagtgagatg
agcagtgcaggaagttactctgtcccacgtcgactgaccagccatttgggaactaaggtg
gaaatggtgtactctctgctgtccatgctgggcacccacgataaagacgacatgtctcgc
accctcctggccatgtcgagctctcaggacagctgcatcgccatgcgtcagtccggctgc
ctgccgctgctcatccagctcctccatggcaacgacaaggactccgtgctgcttggaaat
tctcgcggcagcaaagaggcccgggcgagggccagcgccgccctgcataacattatccat
tcgcagcccgacgacaagcgcggccggcgggagatccgggtgctccacctgctggagcag
atcagagcttactgcgagacctgctgggagtggcaggaaagccacgagcgcggcgtggac
caggacaagaacccaatgccttcaccagtcgagcatcagatttgcccagcggtttgtgtt
ctcatgaaactctcctttgatgaagagcacaggcatgcaatgaatgagcttggtggcctt
caggcgattggggagctgctgcaggtagactgtgagatttacggtcttaccaatgatcac
tacagtgttacactaagacgatatgctggaatggctctaactaatttaacctttggagat
gtagccaacaaggctacactttgctcaatgaaaggttgcatgagagccatggtagctcaa
ctgaagtcagagagtgaggacctacaacaggtaattgccagtgttttgagaaacctctct
tggcgagctgacgtgaacagtaagaagatcttgcgagaagttggcagtgtacgagccttg
atggagtgtgccttagaggttcagaaggaatccacattaaaaagcgtcttgagtgccctt
tggaacttgtcagcacattgcactgaaaacaaagctgatatctgtacggttcctggagct
ttggcgtttttagtgagcactctaacatacagaagccaaaccaacacccttgccataata
gaaagtggcggtggcatcttgagaaatgtttcaagcttaattgccacaaatgaggagcac
aggcaaatattaagggaaaacagctgtcttcagactcttcttcagcaccttaaatcacac
agtctgacgatagtgagcaacgcctgcgggacactttggaacctctctgctcggaacgca
aaagatcaagaggcgttatgggatatgggtgccgtcagcatgctgaagaacctcattcac
tccaagcacaagatgatagctatgggaagcgccgctgctttgagaaacctcatggcgaat
cggcctgccaagtataaggatgccaacataatgtctcccggatccagtctgccatccctg
catgtaagaaaacagaaagcactaattgaagaactggatgcacagcatctctctgaaaca
tttgataacattgacaacctgagcccgaaagcctcccatagggccaagccaagacataag
cataatgtctacggcgattacgatggtgtctgtcgatcagatggctataaccccaatgga
gtcagtgttcgatcaccttatatgaacaccccagtgctctcaagcccatcctctcgagac
aacagaggaaatggggaaagtgtcagagccgagagggacagaagtctagatcgagagaga
aggggtttccattccgacgctgaggctcccaagcgaatggtgcagattcccacaactgcg
gctcagattgcggtagttatggaggaagtgcagagcatgcacttaagcatggatgatcga
accgcaggatccaccccagaccctcacgctgtgcaagacgacatgatccgacggcaaact
gcagttcatggtcaccaaaatatgtacagctatagcaaaactgacccttccggtcgaccg
tgcccaatgcccaaactggagtacagagcttctaatgacagcctgaatagtgtcaacagc
accgatggctatggaaagagaggtcagatgaagccttcagtggattcctattcagaagat
gatgaaggcaaatgctgtgtctacagaaaatatcctgcagaccttgcgcataagatccac
aatgcgaatcacatggaagatgacaatggagatctggacacgcctattaactacagtttg
aagtattctgatgaacagctcaactctggtcggcaaagcccaagccagaatgaaaggtgg
gcaaggcccaagctccttgatgatgaaatgaaacggccagatcagaaaccacagagatcg
caaagcccaggataccccatgtacaccgaagccagcagtgaaggagaagataagctaaaa
aagtaccagcccaggtttgttcaacaggacctgcctggatttagagcgaggggctcaaat
gaacaaattaacagtgggtcgagtcatggacttaacaaaaagatctctcaaactatctgc
gctgttgatgactatgccgacgacaaaccgacaaactacagcgagcgctattcagaggaa
gagcagcttgatgagcaaactccgaactacggcatgaaatacaatgaggaccaccatgta
gaacagcctattgattacagtttgaagtactctgatgcttcctccaagaaggccatgttt
agtcattcgaagccgtcttcgacccaaggttctgtcaaagaccatttaagccaagatagt
tcttcctctgtggcgtctttaaagaaccagggtaggcaaaagcagctccatccttcatct
gctcaaaacagagcaggaccaacaagagcagttcagaagaacccggcatgcaaggctccc
acaataaatcaggaaacattacagacgtattgtgtggaggacactcccatttgtttctca
cgtggtagctctttatcatcattgtcctcagaggaggatgaaatggagagctgcaagcgc
aacgtcaactcggccaataactacccaactctacctatatcagaaaaagaatccactagt
aatattgcatctgaccaacggacaaatgagagccaatcatcaggccattatgttcgcatt
aagcctccacgacatcacttaggacatggagatgcttccaggcatcacaaaacggtggaa
ttttcatcaggtgctaaatcaccatccaaaagtggtgcccagacacccaaaagtccccct
gaacattatgtccaagagactcctctcatgttcagcagatgcacgtctgtcagctccctt
gacagttttgagagtcattccattgcaagttctgtgcagagcgagccatgtagtgggatg
gtaagtggtattatcagtccgagtgatctgcccgatagccctggacaaacaatgccacca
agtcgcagcaagacaccaccacctccaccaccacgatccacgtcagtaaaacaaaaagtt
accatgccgccccattctgaaaaacgtgatttggctccaaggcatgcagtcgtaagtgct
gctgtacagaaagtgcaggttttaccagataatgatactcttttacattttgccacagaa
agcactccagatggcttctcttgtgcttcgagtcttagcgcactaagtttagatgaaccc
tatattcagaaagatgttgagctgaagatcatgcctccagttcatgaagatgaccacagt
aatgaagcagagcttgagaacgaagacattcaagaacccaaggttcaagagaaaccatca
tcgacagctgagcctggaaaagacatcttggatgactcggatgatgatgacgacatagag
attctagaggcttgcattaactcagcaatgccaacgaaatcatcaagaaaaccgaaaaag
caatcgccctcaagcacctctagaatacctccacctgtggctcgcaaaccaagtcagctt
cctgtttataaattgttgccaccacaaaacagaggacaacagcaaaagcacgttgcccta
acacactgtgaggacatgccccgggtgtactgtgttgagggaacgcccgtcaacttttcc
acagcaacgtctctcagtgacctcacgattgattcacccccaaatgagttggcgggtatt
gaaggttcagctccccatccagaagcatctggtcaaagacgagacactctgccagagggg
aaaagtgcagaagctaaagatacaggtttatcacctcccatgcagtctgccctggctgag
aacgaaggggatgatattcttgcggagtgtattaattcggcaatgcccaaaggaaaaatt
cacaagccattcagagtgcaaaagatgcctgaacaggctcagcatccctccaccgccact
ggcaacctagttcagcaagacttggaaaagaaaaagccaacttctcctgtaaaacccatg
ccacaaagcagtgagtatagagcaaggatgcttaaacggccagaggctcctagtagcttg
tcagaaacagcatcatatccagataaaaacaaagaaactgaaaagcaagagcccaaagta
gtcataagagagtttgctgataaggctcctaatgccgaggtgagaacacgtcctgggttt
gcctttgattctccgcatcattacacaccaattgagggcacaccttattgcttctctcgc
aatgattcactgagttcgcttgactttgaggatgatgatcttgacttgtctaaagaaaaa
gctgagctaagaaaagataaagagcagagaaaagttccccctttgaagtgcaatgtagag
cagtcagtaaacaccaacagagtagcagcatttcaggcggctccgacaaaaccccttcaa
aaacaaggagggtttcaacaagcacccaaagaaaatacagttgcagtgtgcgatgagaag
cagaagttttctattgaagacactccagtctgtttctcaagaaattcatcacttagctca
ttaagcgacattgaccaagaaaacaacaataaagattgctcacacaaagatgatgcaact
cagatggaagtgcccaggccacaagcctctggttatgctccaaaggcctttcacgttgag
gacacccctgtgtgcttctctagaaatagctcccttagctctctcagtattgattctgaa
gatgaccttctccaggaatgcatcagttctgcaatgccaaagaaaaagaaacaggcacca
agaagtaagactgaggaaccaggggccaaggaagaaaagagcgtgttggctgatggtatt
ttagcagaggagccggatcttatattagatctcacagacacgcatagccctatttcagag
caagccttatcaccagactctgaatcttttgattggaaagccattcaagagggtgccaat
tctatagtcagcagtctacatcaggctgcagcgagcctctccagacaaggttcctctgat
tcagactccattttgtctctcaaatcgggcatttccattggatcacctttccacctccct
ttaaatcaggaggacaataagcctgcaacaaacaaaggaccaagaatactaaaacctggt
gagaaaagcactttagagtccaaaaagaaagaggaagaaaccaagagcctgaaaggagga
aagaaagtgtataaaagtctaatcacaggaaagccccgacccagtcttgaaagcatgtcc
tctcagcacaaacaagctcaagctcctgtgatctccagagggaggacaatgattcatgtt
cctggtgtgaggagcagctctcctagcaccagtccggtacccaaaaagccccctccacgt
ggccaaatatcaaaaccaccatcccaagcacctggtcctggaaactctccaagaaccatg
aaaatgccagcaggttctgaacctagtcctgctagggacccagcatcatctcaaggaggg
tcaagtaaaacttcctctcgatctgggtctagagactccacaccttctagaccagttcag
caatctctaacaaggcccatgcagtcccctggtcgtgcctcagtttcaccaggtaggaat
ggcttgagcccatccaacaaattatctcagctgcctcgcactgcctcccccagtgctgcc
tcaacaaaatcttcaggatcggggcgaatggcttatacttcaccagggcggcaactgggc
cagcaaacgccaacaaagcagagtggtttgccaagaagtacaagtggaattcctagaagt
gagtctgcctcaaaaagtctaaaccagtgcggagcctcaggctcttcaaagaaggccgag
ttgtctagaatgtcgtccaccaaatccagtgggagcgagtccgaccggtccgagaagcct
ggacttgttcgccaatcaacatttatcaaagaagcccctagtccaacactaaaaaggaaa
ttagaggagtctgcatctttcgagtccttgtctccttcgtctccaagccagtcacagact
ccagtatctagtccatccttacctgatatgtcacttagtctaccctaccagggaagcggt
tggagaaagtcccctcatggtcagaactcttcagagaatggtgatggcaagtcactccgg
aggcatgacatctcccgatcccattcagaaagcccttccaggctcccaatcaacaggacg
gggacatggaaaagggagcacagcaaacattcatcatctctcccaagagtaggcacttgg
aaaagaaccggaagcagctcttcaattctctctgcttcgtcggagtccagtgaaaaggga
cgaagcgaggatgaacggcaacccactccaaaatcggggggtttggaacgcaaaggaaca
tggaggaaaataaaagagagtgaaagctcatacgcaccttctatgacattagacttacca
gatcccaatggtgatgctgctcattcaatgggtgctgctatgtccaagacagaagacgtc
tgggtgagaatcgaagactgtcccataaacaatccaaggtctagtaaatcacccacagca
aacacgcctcccgttattgacagtcagtcaagcaaagggctaccttgtgacagggactca
agcgaatcacactcgaaacagccactcgcaagtgagaatgcagctgtgggccacctgggt
tcagaaacaaatctgaatttactcaggagtagcgaatcccttgataagaaagttgccgat
atcaagcccgcaccaagtaacccaaacactggcacagaggtacatgaatttccagttgct
gaacgcacaccatttagctcgactaactccagcaaacacagctcccctagtggtgctgtg
gctgctagggtaagtccttttaattacacaccaagccccagaaagagtagtgccgacaac
acaactccaagaccatcccagatcccgacgcctatcacaagcaatgcaaaaaagagagac
actaaaggagatacgactgaaagtgggtcttacattgtcacttctgtctaa
DBGET
integrated database retrieval system
