Labeo rohita (rohu): 127171952
Help
Entry
127171952 CDS
T09007
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00780
Biotin metabolism
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
127171952 (hlcs)
Enzymes [BR:
lroh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
127171952 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
127171952 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
127171952 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
127171952 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
127171952
NCBI-ProteinID:
XP_050976887
LinkDB
All DBs
Position
10:complement(24363431..24384877)
Genome browser
AA seq
857 aa
AA seq
DB search
MLITLCYIYLWVRFQRYYTAVIRSALYRLSGGQSSFTFCALKPERVDLPREQRYKPPRED
TLFLRLGDRVIYITEPQACDDLSKWTLLGSSLVCGRRLESIAFIIEATSRPKVPASPHRT
NEKVLNWSDYCLPLAYSPGQPYRAVAEASLENFSRLGVAFMEDRLHMDNGLIPEKIVSVL
LRETALKELFEQQQDGSVEAKRHSEPTEPRDSPQLPRKSSLHLEEPELPSEHQHMDGHHL
HLSSCHECLELENSTILSVKFASVENIPDLPDDYAAAAAAADEESVRRNASGKPPNVLVF
TGGCEERFQKIRSLLEECVDTDSYVIYHLRPQQALSDPWLENTLLLVLATDQTLTPQLQL
RFLSYLSQGGKLLGLSSSLCPAGLALRPRDAQKDRICTLTFTKSDSTELRLSALSSGSVY
VRDGDGEVELWGEIGAQDGREMAIVRVTHGEDSGEAVLCQVRLETAPDAHDAQGSAGFSE
LKMSNARRYEVLTEILTSLGLRCELSQVPPLSPIYLLDTHTEQTGRFLRWLRAQTDGSGG
VVRSTAGVLRAVWAGDEPPDLREGELALHAEPPESFSEHFSPQTYRRHLQTRRLGRTVLY
ADVTSTTMDLLDGLMLQSPQETGLIAIAARQTQGKGQRAAGGNAWLSPLGCAIFTLHLQL
PVDSRLGQRIPFLQHLVALAVVESVRTLPGYEDVDLRLKWPNDIYYSNLMKLGGVLVNST
FIDRTFHLLIGCGFNVSNSNPTVCINDLVRQQNREHGLGLEPLATAQLIGRSVTLLERYV
SEFQLHGSQALLPLYYRRWVHGGTRVRLWSEDGPEAEVLGLDENGFLQVMGDQGVVSVQP
DGNSFDMLRNLVVTKTS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcacgctgtgctacatctacctgtgggtgcgcttccagagatattacacggcc
gtgatccgcagcgcgttgtaccggctgagcggcggccagagcagcttcacgttctgcgcg
ctgaagccggagagagtcgatctgccccgcgagcagcgctacaaacccccgcgggaggac
acgctcttcctcaggctcggagacagagtcatttacatcaccgagccgcaggcgtgtgac
gacctcagtaagtggactctgttgggctcttcgctggtttgtggccgaagactagaaagc
atcgccttcattattgaggccacttcaagaccgaaagttccagcgtctccacacagaacc
aatgagaaagtgctgaactggtctgattactgtctgccgttggcgtacagtcctggacag
ccgtaccgagccgtcgctgaagccagcctggagaatttcagccgcctcggtgtggctttt
atggaagaccgtctgcatatggacaatggactcatccctgaaaagatagtttccgtgtta
ctccgagagacggccctcaaagagctgttcgaacagcagcaggacggcagcgtcgaagcc
aagcgccacagtgagccgacagagccgcgagactctccgcagcttcccagaaagagcagc
cttcatctggaggagccggagctcccgtccgaacaccagcacatggacggacaccacctg
cacctctccagctgccacgagtgtctggagctggagaacagcaccattctgtcggtgaag
ttcgcctccgtggagaacatcccggatctgcccgacgactacgccgccgccgccgccgcc
gccgacgaggagagcgtgaggaggaacgccagcgggaagccgcccaacgtgctggtgttc
acgggcggctgcgaggagcgcttccagaagatccgctcgctcctggaggagtgcgtggac
acggacagctacgtcatctaccacctgcggccgcagcaggccctgagcgatccctggctg
gagaacacgctgctgctggtgctcgccaccgaccagacgctcacgccgcagctgcagctg
cgcttcctgtcctacctgagccagggcgggaagctcctgggtctgtcgtcgtcgctgtgt
cccgccgggctcgcgctgcggcccagagacgcgcagaaagaccgcatctgcacgctgacc
ttcaccaagtccgacagcacggagctgcggctgagcgcgttgtccagcgggagcgtgtac
gtgcgcgacggcgacggcgaggtggagctctggggcgagatcggcgcgcaggacggccgc
gagatggcgatcgtgcgtgtgactcacggagaggacagcggagaggccgtcctgtgtcag
gtgcgtttggaaacggctccggacgcccatgacgctcaaggctccgccggcttctcggaa
ctcaagatgagcaacgcccggcgctacgaggttctgacggagatcctgacgtctctgggt
ctgaggtgtgagctgagtcaggtgccgccgctcagccccatctacctgctcgacacgcac
acggagcagacgggccgctttctgcgctggctgcgggcgcagacggacggttcgggtgga
gttgtgcggagcacggcgggcgtcctgagggcggtgtgggccggagacgagcctccggat
ctgcgcgagggcgagctcgcgttacacgccgagccgcccgagagcttctccgagcacttc
agcccgcagacgtaccgccggcacctgcagacgcggcggctcggccggaccgtcctgtac
gccgacgtcacctccaccaccatggacctgctggacgggttgatgttgcagtcgccacag
gaaacggggttaattgccatagcggcgcgtcagacgcagggcaaaggtcagcgggccgcg
ggggggaacgcgtggttgagtccgctgggatgcgccatattcactctccacctgcagctt
cctgtggactcgcggctcggccagaggatcccgttcctgcagcacctcgtcgccctggcc
gtggtggagtctgtgcgaacactgcccggatacgaggatgtcgacctgcggctgaagtgg
cccaatgacatctactacagtaacctgatgaaactcggcggtgttctggtcaattccacc
ttcatcgatcgaaccttccacctcctgatcggctgcggcttcaacgtgagcaacagcaac
ccgaccgtctgcatcaacgacctggtgcggcagcagaaccgggagcacggcctcggcctg
gagccgctcgctacggcgcagctcatcgggcgctcggtcacgctgctggagcgctacgtc
tcggagttccagctgcacggctcgcaggcgctgctgccgctctactacaggagatgggtg
cacggcggcacacgcgtgcgtctctggagcgaggacgggcccgaggccgaggtgctggga
ctggacgagaacggcttcctgcaggtgatgggagatcagggcgtcgtgtccgtgcagccg
gacggaaactccttcgacatgctgaggaacctggtggtgaccaaaaccagctga
DBGET
integrated database retrieval system