Labeo rohita (rohu): 127172567
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Entry
127172567 CDS
T09007
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127172567
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127172567
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Motif
Other DBs
NCBI-GeneID:
127172567
NCBI-ProteinID:
XP_050977846
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Position
10:29063336..29079025
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AA seq
753 aa
AA seq
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MLGNGGLYAVRKRKRPAHKSCGLETKPQDGTKSNPSKRHRDRLNGELDKLAALLPLPEEV
RARLDKLSVLRLSVGYLKIKNYFTGTLRKNSGPEFSRNGVETTSSLASIGVSEGDLLLQA
LNGFVLVVSTDGCIVYASPTIQNYLGFHQSDVLHQSVFDLIHVDDRFVFRCQLHFALDPE
ASIDEPAGSERIPPENSSFLERSFCCRLRCLLDNSSGFLALSFQGRLKYLHTQDRTTEGK
ASSVSQLALFAIATPVQSPAILEIRTKTLFFQSKHKLDFTPVGMDTRGKVVLGYTEQELC
MRGSGYQFIHAADMMYCADKHVHMMKTGESGISIFRLLSKTGVWVWVQSNARLVLKEGKP
DFIICDQKPLTNEEGEEHLRQRQLQLPFNFATGEGLLYETLPSVMIPGRQDHSSSTTVHP
DSLLGSLLSQDRSVYNQPPEPASPFSLAHVFMDSPALLSIPNNIHRDFTSQTVPDTDDGV
LKEQLKEMEAALLQLQEKEPIQLSDILANDVFSYVEDALSRETDTTGRHQNSVLPGNPIM
RCEYSSSHSQKLIESDFYRQKAPERECANDSQDYFGTLKSFPHPPNTCRSIPGHFPIPYH
NNRSSSIQKTGMVSSDPFQNNHLPPSVPGRPFSVNIQHAVHRGALPPWQPHQHAIPLTLQ
RSRCVQNDCITHNAPVTQHPQDTELQKELCGTYAMNHGLRSHISQNSSLSSSSFSYQRCT
LSSNETFSGLHITGSVDTDCSRATCPGTSGLSL
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctggggaatggagggttatacgcggtgaggaagaggaagagacccgctcacaagagt
tgtggcctcgaaaccaaacctcaggacggcactaaatcaaacccttccaagcgtcacaga
gaccggctgaacggcgagctggacaaactggcggctcttctgccgctgccggaggaggtc
cgagcacgactggataaactcagtgtactcagactcagtgtgggatacctcaagatcaaa
aactacttcactggtacattaaggaagaattcaggacctgagttttctcgtaacggtgtt
gagacgacatcttcactagccagcatcggcgtctctgaaggggatctgctgcttcaagcg
ctgaatggttttgtcctggttgtgtccacagatggctgcatcgtctacgcttcacccacc
attcagaactacctgggtttccatcagtctgacgtgcttcatcagagcgtgtttgatctg
atccacgtggatgaccggttcgtgttcagatgccagttgcactttgccctcgaccccgag
gccagcattgatgaaccagcgggcagtgagaggattcctccagagaactcgtcctttctg
gagaggagcttctgctgtcgtctccgctgtctgctggacaactcctctggcttcctggca
ctcagttttcagggacggctgaagtatcttcacacacaagaccggaccacagagggcaaa
gcgtcgagtgtctcgcagctcgccctgtttgccattgccacccccgttcagtccccagcc
atcctagaaatcaggaccaagaccctctttttccaaagcaaacacaaactggattttaca
ccagtgggcatggacaccagggggaaggtggttctgggttacactgagcaggagctgtgc
atgagaggatctggatatcagttcatccacgctgctgacatgatgtactgcgccgacaaa
cacgtacacatgatgaaaactggcgagagcggtatctccattttcaggctcttgagtaag
accggcgtttgggtctgggtccagtccaacgctagattggtgctcaaggaaggcaaaccc
gacttcatcatctgcgatcagaaacccttgacaaatgaagaaggcgaggagcatctccgt
caaaggcagctgcagcttcccttcaactttgcaacaggagagggtctcctctacgaaacc
ttaccctctgtgatgatcccggggcggcaggatcattcgtccagcaccaccgtacatccc
gactccctcctgggctccttactgagtcaggaccgctccgtctacaaccagcccccggaa
ccagcgtctcccttctctctggcgcacgtctttatggacagccctgccttactcagtatt
cccaacaacatccatcgggatttcacctcccagaccgttccagacacagatgacggagtc
cttaaagagcagctgaaagaaatggaagcagctctgctgcagctacaggaaaaggaaccc
attcaactcagcgatattctggccaatgatgttttctcatacgtcgaagatgctctgtcg
agagagacagacaccactgggcgtcatcaaaactctgtgttgcctggcaacccgataatg
agatgcgaatattcatcatctcattcacagaagctcatagaatctgacttttatagacaa
aaagcaccagaaagagagtgtgcgaatgattcccaagactattttggcactctgaaatct
ttcccacatcctccaaacacttgtagatctattccaggccatttccccatcccatatcat
aataatcgctcttcctctatacaaaagactggcatggtgtcgtcagatccattccaaaac
aatcatcttccaccaagtgtccccggtcggccgttttccgtaaacatccagcatgccgtt
caccgaggcgccctgccgccatggcaaccgcatcagcacgccatcccattaaccctgcag
agatcccgctgtgttcagaatgactgtattacccacaatgcacctgtaacgcagcaccca
caggacactgagttacaaaaagaactgtgcggcacatatgcaatgaatcacggtctgaga
agccacatatcccagaattcatcattgtccagtagcagtttctcatatcagagatgtact
ttatcttctaatgagactttttctggattacacatcactggatctgtggatacggactgc
agccgtgctacctgtcccgggacatcaggactgagcctttag
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