Labeo rohita (rohu): 127172975
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Entry
127172975 CDS
T09007
Symbol
apc2
Name
(RefSeq) LOW QUALITY PROTEIN: adenomatous polyposis coli protein 2
KO
K02085
adenomatosis polyposis coli protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04310
Wnt signaling pathway
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127172975 (apc2)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127172975 (apc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127172975 (apc2)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127172975 (apc2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127172975 (apc2)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127172975 (apc2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
127172975 (apc2)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
127172975 (apc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_basic
Arm_APC_u3
APC_rep
Arm
APC_N_CC
Suppressor_APC
APC_r
SAMP
HALZ
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
127172975
NCBI-ProteinID:
XP_050978505
LinkDB
All DBs
Position
11:complement(1821698..1853220)
Genome browser
AA seq
2507 aa
AA seq
DB search
MMSYPTASYDQLVRQVEDLRKENSHLRRELQDNSHHLSKLENETSDMKEVLRQLQSKLEQ
EAGTLASSGRTDVLDQLKELHMDLTNYYELKYQPHNLRVFPETLASQVGEGEERMSIGRA
RSPVCPPSRQSSSASGEGTAVHPGHPHQTAGEGRVTAQHLEDLCKERSMLLSEIEKEERE
RRWYYSQLQGLSQRLAELPRLDTFSMQVDFIRQQLEFEAQQLRSVMEERFGTSDEMVQRT
QIRVARLEQLEKELHEAQSSRGPQEKSALPETQSTECLSKASAPDTDTGNAGTLEAPGEA
GSKVEMVFWLLSMLASRDREEMSRTLLAMSSSQESCIAMRKSGCVPLLVQILHEXGAPGE
AAGTGGYSREARSRASAALHNIVYSQPDEGQARREMRVLHVLEQIRSHCENGWDWIENHL
NTPSPGGAKTTEIPEPVDPQMCQALCAIMKLSFEEEYRRAMNELGGLQAIAELMQLDQEL
HGMQNEPINMALRRYAGMALTNLTYGDVVNKATLCSKKNCLQAIVAQLASESEELQQVVS
SILRNLSWRADINSKRALRDVGSVSALMTCALQATKESTLKSVLSALWNLSAHSTENKVA
ICSVDGALGFLVSTLTYRCQTNSLAIIESGGGILRNVSSLIATRDDYRQILRDHNCLQTL
LQHLRSHSLTIVSNACGTLWNLSARSPKDQELLWDLGAVSMLRNLIHSKHKMIAMGSAAA
LRNLLTNRPLKYKDTAVISPGSCMPSLYMRKQKALEAELDAKHLAETFDSIEKQSFKHQS
INKPLRHIESLAKDYASDSGCFDDDEAPNVSTSLDTGTFSMLSMFLNNSNFLNTQPRKRE
GEPEQDVETFQTENKRSQPPDDEVTVAAEKLAKKITNTVAKIDKLVEDITMHTSSEDSFS
LSSEDHFVDWNYGPDELHEARAISCSPCHFSDTSSFSPKERLSRAHAFLRLKTANSSLSN
DSLNSGSTSDGYCGSQDQTHMSAKPTEQRRPNKLDLKVAHEEPVNSGLHISRVMCQNEIP
ERDFETNKDPILPDLGSTDTEKSQEPFISTPATVSTKVSSDASIPTVKLSPSYQHVPLIQ
SVAKFGVAKTAINVQAAQAMRRQAWVPTVMTGGSISKFSPICSARSPTIGQLETPQKYSV
ENTPICFSRCSSLSSLSSGDGALDGQSQTENELESDSSLEIIEVEDVNVERKDEEDETLD
DLSDSQLLLTDQKISSSEPAEIPSTIKNEKRFLRGVSPVILEDRTPSSSSENYIHETPLV
MSRCSSVSSLGSFESPSIASSIQSDPCSEMISGTVSPSDLPDSPGQTMPPSRSKTPCCAE
SSGPETQNLSGVGSQWENSLRKFMEIADFKERFNLPPDLDTMIYFTVEKPIENFSCASSL
SALPLHEHYVQKDVELKLTPLLNQQDNDPEDSEKEDDMDDQDQYSEGNSDDDIEILKECI
NSAMPSRFKKLRPTVMPNLSNQVLNMQTRKSVQLPVYMVLQNKNNQMNTGQKLGMSSKEI
YHDDSSYTDSAEGTPINFSSTTSLSDETLQYPLRTKGMKDWRRNKETQELIDIEAKRIED
LRMFSRFHKPTKMTCQSHIVTNQLNKTIRHMVPTQRLLIQSKEMAAKMTQQRIQSQSPVR
QIQKQGQNLSKSMPQLDIPVRKQNTEVYQNQKTCSLSHAQENSLAFQTRHHPTTTDGTMC
HKTDRQDRLMNRTGQKQYYESSKTNIIRNSNIQDQVNSYQSRQKGFHRIKQNLILEEAPP
CYSLSSSLSSLSDAEFEEHHEKLQHTWIRNKHNITSNAQCPPKSQQEHNQFEENSSPSSV
SMDSEDDLLIKCITSAMPQHKKKQAARKKKAEKKHKQKAALQKATEWSPENDLDSDEMGS
DKDSDLNSVEWRAIQEGANTIITKLQASKSQEPSSESESVMSFMSGSSFTPKEKKVYKDD
KKANKPLDFAPRKPVPNLPVVFRGRTVIYTPKKETTLSQRPPTKKVTQKPDAPKNPDLAQ
HRSRSLHRLGNPMESTQFSLPKRSSTPPARIPKSSSSGSSQSSTPSRHPQKKVTSPTQTI
KQSPEKVASAPCSPPDKRGSVSNTNQNSKSPIDRKTQKSPVRIPFMQNPSRQTRNISPLV
TNQPTSISRQSTQMSGKRILPANRLDLVRMTSTYSSSGESDRNGFLRQLTFIKESSKASR
RDASSRSVPTSQHASPRRAVPGAPAVFLCSSRCQELKEAVQGPRRMPVTQGQRQVQEQGV
LRQGMAPTRAASIDRDVTVKRPARRTSSESPCRASQRNTPAPKPREKREDTFKRYSSSPS
INVLSRVTSRSSLRSSSSDSSGRAKSERNASQRQQRAGSRNSDKVTWRRIRDEDVPQILR
STLPPTALPLLPSPEGPKQMPPPLPGKLPTITLASRKTSDATVQTEDYSANKTNSSTSPT
IDKVLGITEEATKMVLPRKISMAFGNTLHDGDSDGSLKTYSTASTSTFQSMESTHSGGVG
HFRQSSPSKAVRVTPFNYIPSPMVYCSPQTHGQAQTTLEKAGDKHEA
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtacccaacggcctcctatgaccagctggtgcggcaggtggaggatctccgt
aaggagaactctcacctgcgccgtgagcttcaggacaactcacaccacctgtccaagctc
gagaatgaaacctctgacatgaaggaggttctgaggcagttgcagagtaaactggagcag
gaggccggaactcttgcctcttcaggcagaactgatgtgctggaccagctcaaagagctg
catatggacttgaccaactactacgagctcaagtaccagcctcacaacctgcgtgtgttt
ccagagacgctggctagccaggtaggagaaggcgaggaaagaatgagcatcggcagagcc
aggagtcccgtctgtccaccgtcccgccagtcctcatctgcatctggagagggcacagcc
gtgcaccccgggcaccctcatcagaccgctggagaaggccgtgtcactgctcagcactta
gaggatctctgtaaagagaggtccatgttgctgagtgaaatagagaaagaggagagagag
cggcggtggtattactcacagctgcaaggtttatctcagagactggctgaactgccacgg
cttgatacgttctccatgcaggttgattttattcgtcagcagctagagtttgaagctcaa
caactgcgctctgtgatggaggaacgtttcggcaccagcgacgagatggttcagagaaca
caaatccgtgttgctcgactggagcagctggagaaagagcttcatgaggcacagagctcg
cgtggtcctcaagagaaaagtgctctaccagaaactcagagcaccgagtgcctctcgaaa
gcatctgcacctgacacggatactggaaatgctggtactttggaggcccctggagaagct
gggagcaaagtggagatggtgttttggctgctgtccatgctggcctctagagatcgagag
gaaatgtcccgtacccttctggcaatgtcaagctcacaggaaagctgcattgccatgcgc
aagtctggttgcgttccactgctagtgcaaatactacatgagnngggggcaccgggggag
gcagctgggacaggaggctatagtcgagaagcccgttccagagccagtgctgccctgcac
aacattgtgtactcgcagccagatgagggccaagcacgacgcgagatgagagttcttcat
gtgctagagcaaatccgctcacactgcgagaatggctgggactggattgagaaccattta
aataccccctcacctggtggagccaaaaccacagaaatccctgagccggtggatccccag
atgtgccaggccttgtgtgcaataatgaagttatcttttgaggaagagtaccggagggcg
atgaatgaactaggtggcctgcaagctattgcggagctgatgcagctggaccaagaactg
catggcatgcaaaacgagccaatcaatatggcgctccggcgttacgccggaatggcactc
actaatcttacatatggagatgttgtaaataaggctacactttgctcaaagaaaaactgt
cttcaagccattgttgcacagcttgcatctgaaagtgaggaattacagcaggtagtgtct
agtatactgagaaacttgtcatggcgtgctgatatcaacagcaagagggctttgagagat
gttggtagtgtgtcggcgcttatgacttgtgcactgcaggctacaaaggagtccacttta
aagagtgtgctcagtgcactgtggaacctgtcagcacacagcactgagaataaggtggca
atttgctctgttgatggtgctcttggctttttggttagcactttgacttatcgatgccaa
accaactcactggccattattgagagtggtggaggtatcctgcgtaatgtgtccagcctt
attgctacccgagacgattacaggcaaatcctcagggatcataactgccttcagactctg
ctgcagcacttgcgatctcacagtctgaccattgtgagtaatgcatgtggaaccctctgg
aacctgtctgcaagaagtccaaaggaccaggaattgctgtgggatctgggagctgtaagc
atgctgcgcaatctcatccactcgaagcacaaaatgatagccatgggaagtgctgcagct
ttgcgaaacctcctcacaaatcgtccactgaaatataaagacacagctgttatatcccca
ggatcctgcatgccatccctctacatgaggaagcagaaagcattagaggccgagttggat
gcgaagcatctggcagaaacattcgattcaattgagaagcaaagttttaagcatcaaagt
ataaacaagccactgaggcacattgagagcctagcaaaagactatgcctcagattctggt
tgttttgatgatgatgaagcacctaatgtatcaaccagcttggacactggaaccttttcc
atgctctctatgttcttgaacaattctaacttccttaatactcagccacgtaagcgagag
ggggagcccgaacaagacgtcgaaacctttcagactgaaaataaaaggtcgcaaccgcct
gatgatgaagtgactgtggcagctgagaaattagccaagaagatcaccaacacagtagct
aaaattgacaaactagtagaagacattaccatgcatacatcctcagaagacagcttcagc
ctcagctctgaagatcattttgtggattggaattatgggccagatgagcttcacgaggca
cgagccatttcctgttccccttgtcatttttctgataccagctctttttcacctaaggaa
cgactcagcagagcacatgccttcttgcgtcttaaaacagccaactcgagtttatccaat
gacagccttaacagtggcagcaccagtgatggctattgcggcagtcaggaccagactcac
atgtctgcaaaaccaacagaacaacgacgtccaaataaacttgaccttaaggtagctcat
gaggaaccagtgaacagtggtttacacatttcaagagtcatgtgtcagaatgagatccct
gaaagagattttgagacaaacaaagatcctattttgcctgatttaggttccactgataca
gagaagagccaagaaccttttatatcaacgcctgcaactgtatcaaccaaggtgtcttcg
gatgctagcataccaactgtcaagttgtctccctcctatcagcatgttccactgatccag
agtgttgccaagtttggcgttgcaaaaactgcaattaatgttcaggcagctcaagcaatg
cgcaggcaagcttgggttccaacagtgatgactggaggtagtattagcaagttttcccca
atatgctctgcaagaagccccacgattggacagttagagacccctcagaagtattcggta
gagaacactccaatatgcttctctcggtgcagttccctgtcctcactgtcttctggggat
ggagctcttgatggacagagtcagactgaaaatgaactagagagtgactcctcgttagaa
atcatagaggtggaagatgtgaacgttgagagaaaagacgaagaggatgagacacttgat
gacttgagtgacagtcagttattattaactgatcagaaaatcagcagctctgaaccagct
gagatccctagtacaatcaaaaatgagaagaggttccttagaggagtgtctccagtaatt
cttgaggacaggacaccatccagctcttcagaaaactacattcatgaaacacctctggta
atgagccgctgtagttcagtaagctcacttggcagttttgaatctccttcaattgccagc
tctattcagagcgacccatgtagcgaaatgataagtggaactgttagccccagtgacttg
ccagacagtccaggacaaacaatgcctccgagtcgcagcaaaactccatgctgtgcagaa
tcaagtggaccagagacacagaatcttagtggtgtagggagtcagtgggaaaacagtttg
cgcaaatttatggaaatcgcagactttaaggaaaggtttaacctacctccagatttggac
acaatgatctatttcactgtggaaaaaccaattgagaatttctcatgtgcctctagtctg
agtgccctccctctgcatgaacactatgtccagaaagatgtggagcttaaacttactcct
ttgctaaaccagcaagacaatgatccagaggattctgaaaaggaagacgacatggatgac
caagaccagtatagtgaaggcaactcagacgatgacatagaaattctgaaagagtgcatt
aattctgccatgccttccaggtttaagaagctaaggccaactgtgatgcccaacctctca
aaccaagttctcaacatgcagactcgaaaatctgtgcaattaccagtgtatatggtgctg
cagaataaaaacaatcaaatgaacactggacaaaagcttggaatgtcttcaaaagaaata
tatcatgatgattcctcttatactgattctgctgaaggtacacccattaatttttcaagc
accacttccttgagtgatgaaactctccagtatccactcagaactaaaggaatgaaagat
tggcgaagaaacaaagagacacaagagctgattgatattgaggcaaagagaattgaagac
cttcgcatgttctcccgcttccacaaaccaaccaaaatgacatgccagtctcatatagtc
acaaaccaattaaacaaaacaatcagacatatggtacccactcagagattacttatacag
agtaaggagatggcagcaaaaatgacccagcaaaggattcaaagccagtctccagttcga
caaattcaaaagcaaggacagaatctgtcgaaaagcatgccacagttagatattcctgta
agaaaacaaaacacagaggtgtaccagaatcagaaaacctgctccctgagtcatgcacag
gaaaacagtttagcctttcaaactaggcatcacccaacaactacagatgggaccatgtgt
cataaaacggacagacaggatagactgatgaataggacgggacagaaacagtattatgaa
tcgagcaagactaacataatacgtaattctaatatacaagatcaagtcaacagttaccag
tcccgacaaaagggttttcacaggatcaagcaaaatctaattttagaagaagcacctcca
tgttactctttgagttcctctcttagctctttgagtgacgcagaatttgaggaacatcat
gaaaaacttcagcatacatggataagaaataaacataatataacatccaatgctcagtgc
cctccaaaatcacagcaagaacacaaccagtttgaagagaacagctcgccaagctcagtc
agcatggattcagaagatgatcttttgataaaatgcataacatctgcaatgcctcaacac
aagaaaaagcaggcagccagaaaaaagaaagctgagaaaaagcacaaacagaaagcagct
cttcagaaagcaacagagtggagtcctgaaaatgacctagattctgatgaaatgggatca
gacaaagactctgatctcaacagtgttgaatggagagcaatacaagaaggagctaataca
atcattaccaagttacaagcttcaaagtcccaggagccctcttcagagtctgaatcagtt
atgtcatttatgtctggttccagctttactcctaaagagaagaaggtatacaaagatgac
aaaaaggctaataaaccacttgactttgcccctcgtaaacccgttccaaacttgcctgtg
gtcttcaggggtagaacggtgatatacacgcccaagaaagaaacaactctctctcaaaga
ccaccaactaaaaaagtgacacagaaaccagatgcccctaaaaatccagatctagctcaa
cacaggtcaagaagccttcacagactgggcaaccccatggaatccacacagttttcattg
cccaaaagaagctcaacaccacctgccaggataccaaagagctcatcttcaggatcatct
caaagttcaactccttccaggcaccctcagaaaaaggtaacctccccaacccaaaccatt
aaacaaagtccagagaaggtggcatcagcgccatgcagtccaccagacaaacgaggcagc
gtttcaaataccaatcagaactcgaaatctcctatagacaggaaaacacagaaatcccct
gtcagaataccattcatgcagaacccatcaaggcaaacaagaaacatttcacctttagta
accaaccagcccacaagcattagcagacaaagtacgcagatgtcagggaaaagaatccta
cctgcaaatcgactggatttggttcgcatgacatctacttattcaagtagtggtgaatca
gatcgtaatggcttcctcagacaactgacattcatcaaagagtcgtcaaaagcctcaaga
cgtgatgcttcttcacgttctgtcccaacatctcagcatgcctcaccccgcagagcagtt
cccggagccccagcggtcttcttatgttcttctcgttgtcaggagcttaaggaagcagtt
caaggcccaagaagaatgcctgtgactcaaggacaaagacaagtgcaggaacagggggta
ctcaggcagggcatggctccaacgagagccgcctcgattgatagggacgtcactgtgaaa
cggccagctagacgaacaagctcggaaagtccttgcagggcctcacagagaaatacacct
gccccaaagccaagagagaagagggaggataccttcaaaagatattcctcctcaccaagc
ataaatgtcttgagtcgtgtcaccagtcgctcctctcttcgttcttcatcctccgactca
agcggacgagctaaaagtgaaaggaacgcaagtcagaggcaacagagagctggatcacgc
aactccgacaaggtgacctggcgaaggattcgcgatgaggacgttccccagatattaaga
agcacccttccacccactgcactgcctctgttgccttcacctgagggccccaaacagatg
ccaccaccgctcccaggaaaactgcctactattactctagcatcacggaaaacaagtgat
gcaactgttcaaactgaggactactccgccaacaaaacaaattcaagcacctctcccacg
atcgacaaagttcttggcatcacagaagaggccacaaagatggtgctccccaggaaaata
agcatggcctttgggaataccctccatgatggggattcggacggatctctcaaaacctac
agcacagcatcaacctccacctttcagtcaatggaaagcacccacagtggtggtgttggc
catttccgacagagctcccctagcaaagcagtcagagttactcctttcaactacatccct
agccccatggtctactgctctccacagacacatggtcaagcacagacaacactggagaag
gcaggggataaacatgaagcataa
DBGET
integrated database retrieval system
