Labeo rohita (rohu): 127173488
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Entry
127173488 CDS
T09007
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127173488 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127173488 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127173488 (grin3bb)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127173488 (grin3bb)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Uds1
Motif
Other DBs
NCBI-GeneID:
127173488
NCBI-ProteinID:
XP_050979360
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Position
11:complement(8010292..8108155)
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AA seq
1120 aa
AA seq
DB search
MNFVFLTFLAYFYLGSQIFLLNTLLVQPAHSHPQPCHILARIGHTVRLGALLPPRQSVRV
RAALHRALSGLAESGNNFLPYNLSLDVVAREAPSGDPESLFRCVCQDIVVQGVSAVLAFP
QTQEEIVQMEFMSSFLEIPFISIIEHGEPLRTQNRFHLQMTTRIPSSGLVELLLAVLQRS
GWEESMAVLCQGWEDAGLLDLLKLQGRSDWGPSHWHMRAALNLSHSTPHVANISDFLSEH
FNQDHSPPASVLLFGADPECASSVLRSAHDLGLTLPTVHWIMGQPLSPDALHSIGLPLGL
LAYGEVDRKPLDYYIRDALQLVNRAVTAATVVRPDLALIQNMVNCFDKPNKHELPSSGQY
IARFLSNTSFVGLTGPVSVKRNLSRVHTSQRVHIWSLRRDAVGQPTWVTVGSWEGGRLDV
EEQGLWQGSPPRQRTEGQMSKVGRRWRAGFPVSGNRLRVVTLVEHPFVFTREVDEDGNCP
AGQYCLDARTNSSETLDQLYTERAQGNNSFLPRDFSKCCYGYCIDLLEKLAEDMNFEFDL
YIVGDGKYGAVNDGQWTGLVGDLLSGVADMAVTSFSINSARSKVIDFTSPFFSTSLGILV
RSKDTAAPIGAFMWPLHWSMWMGIFVALHITALFLTLYEWKSPFGMTPHGRNRVKVFSYS
SALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEV
SGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRTFNEPTTPKGVATLKTDPP
QLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFISRYKSD
GYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFVLLCVGVTGALLTLAGEHAFYR
LVLPHIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRANTEKSCNIQKAQPHPPPPPAPL
GSFARWNNESTKAVQEPKDNKRVHFNLETLNTRRLLPRVMSEGSQASSGSASALSSGAGS
LLARVCENGGPVQRPAPSSSSSSVRSSSPSRESELEELQVKIEEIREHLKAALARRAELQ
TTLAKERAAAVIAPPTTTAPPTVTATICPALTKEPADLKR
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgtcttcctcacattcttggcatacttttatttgggatcgcaaatattcctt
ctcaataccctgctcgtccagcccgctcactctcacccgcagccctgccacatcctagcg
cggataggacacaccgtgcgcctgggtgccctcctgcctccccgccagtcggtccgggtg
cgggcggctctccaccgcgccctcagcggtctcgccgaaagcggcaacaactttcttccg
tacaacttgagcctggacgtggtggctcgggaagccccgagcggagaccccgagtcgctc
ttcaggtgtgtgtgtcaggatatagtggtccagggggtctcggctgtgctcgccttccct
cagacgcaggaggaaatagtacaaatggaatttatgtcctcttttttggaaattcctttt
ataagcatcattgagcacggagaacccctcagaactcagaatcgcttccacttgcagatg
acaacccgtatcccctcgtcaggactggtggagctgcttctggccgtcctgcaacgcagt
ggctgggaggagagcatggcggtgctttgccaaggctgggaggatgctggtcttctggat
ctcctaaaactccaaggccgctcagactggggaccctcacactggcacatgcgggccgct
ttgaacctctcccacagcacacctcacgtggctaatatttctgacttcctgtccgagcac
tttaatcaggaccattctccacccgcctcggttctgctttttggggccgacccggagtgt
gcctcttctgttctgcgcagtgcgcatgacctggggctgacattgcccactgtacattgg
attatgggacaacccctaagcccggatgcccttcattctattggtttgcctttaggactg
ctagcctacggagaggtcgaccgcaaaccgctggactactacattcgtgatgccctgcag
ttggtcaaccgagctgttactgcagcaacggttgtacggcctgatctagccctcatccag
aatatggtaaactgttttgacaaacccaacaaacatgagctgccctcatcaggacagtac
attgccaggttcctctctaatacatcctttgtagggttaacgggccctgtcagcgttaaa
cgcaacctctcccgtgtacacacctctcagagggtccacatttggagtctgcgccgtgat
gccgtcggtcagcccacgtgggtgactgtaggcagctgggaaggtggtaggctggatgta
gaggagcagggattatggcagggctcgccccctcggcagcgcaccgagggccagatgagc
aaggtgggtcgtagatggcgggctggcttccccgtgtcggggaatcgtctgcgggtggtc
actctagtggagcacccgttcgtgttcactcgagaggtagatgaggatgggaactgtccc
gctgggcagtactgtctagatgcaaggacaaacagctcggaaaccctggaccaattgtac
accgagcgggctcaaggcaacaacagcttcttgccacgggatttcagcaagtgctgctat
ggatactgtattgatctgctggagaagctggcagaagacatgaatttcgagtttgacctg
tacatagttggggatgggaaatacggagctgtcaatgatgggcagtggacggggttggtg
ggcgacctgctgagcggggtggccgatatggctgttaccagcttcagcatcaactcagct
cgcagtaaagtgatcgacttcaccagtccgttcttttccacgagtttaggaatactagtg
cgcagtaaggacacggctgcacccatcggagcgttcatgtggccgttgcactggtccatg
tggatgggcatctttgtggcgctgcatattacagcactcttccttacactctatgaatgg
aagagtcccttcggcatgacgcctcatggacgtaaccgtgttaaggtcttctcctactcc
tcagccctcaacctctgctatgccatcctcttcggccgcacagtctccagtaagacaccc
aagtgttggactggacgtttcctgatgaacctgtgggccatattctgcttgctggttttg
tctagttacacagcaaacctggctgcagttatggttggggaaaagaccttcgaagaggtc
tctggaatacatgatgccaagctccaccacccatctcagggatttcgattcggcactgtt
cgggaaagcagtgcagaggattacatgaaaaagagttttcctgagatgcacgagtacatg
cggacattcaacgagcccaccacgcccaaaggtgtcgccaccctcaagacagatccgcct
caacttgatgcttttatcatggacaaagcactgctggactacgaggtgtccattgatgcc
gactgcaagctgctgaccgttggtaaaccctttgctattgaaggttacgggatcggacta
ccccagaactcaccgctcacctccaacatatctgaattcatcagccgttacaagtcagac
ggctacatggacatgctgcatgacaagtggtacaaggtggtgccgtgcggaaagagagtc
tttgctgttacagagacgctgcagatgggcattcgacacttctcagggttgttcgtgctg
ctgtgtgtgggtgtgaccggggccttactcactctggcaggagaacacgccttctatcgc
ctggttctgccacacatccgtcgcagacagaagttcaaatactggcttcacaccagtcag
aaaatccacagagctctgaacatgacttatgaggatgtgaaacgacagcgggcgaacaca
gagaaaagttgcaacatccagaaagcccagccgcatccaccacctccacctgctccgctc
ggatccttcgccagatggaacaacgagagcaccaaagcggtgcaggagcccaaagacaac
aagagggtccatttcaacctggaaaccctcaacacgcgccgactcttgccgcgcgtcatg
tcggaggggagtcaggccagctccggttccgcctcagcgttgagctccggagctgggagt
ttattggcgagagtgtgtgaaaacggaggccccgttcagcgacccgccccctcctcctcc
tcctcctcagtgagatcctcgagcccctccagagagagcgagctggaggagctccaggtc
aagatcgaggagatccgcgagcatttgaaagccgctctggctcgtagggcggagcttcag
actacactggctaaagaacgcgcagccgcagtcatcgccccgcccactacgacggctccg
cccacagtcacagccaccatttgccccgccctcaccaaagagccagcagatctgaaaagg
tga
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