Labeo rohita (rohu): 127174911
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Entry
127174911 CDS
T09007
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127174911 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127174911 (polr1b)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127174911 (polr1b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127174911 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
127174911
NCBI-ProteinID:
XP_050981545
LinkDB
All DBs
Position
13:29027683..29040938
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLNKWCNLKSEPSLKNLTEAGFGVPKEKQHVPVQELVKAHIESFDQAVTDGLCRVVEAI
PPMEFMYKGDRISLSFVEAIIHTPAVSKGGISKDLRVFPAECRGRRCTYKGKLVADVSWS
INGIPKGIIKQSLGQVPIMVKSKLCNLYGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPITVSRPKFKSRGQGYTQYAISMYCVRDEHTSINMNLHYLDNGTVMVNFIYK
KELFFLPLGFALKALVDFSDYQIYQELIKGREDNSFFKSCVSEMLRMVMDQGCMTKAKVL
NYLGERFRVKLNLPEWFTHEQCAHFLLDECLCIHLKSDVEKFYMLCLMTRKLFTFAKQEC
MEESPDSLMFQEVLTPGRFYLMFLKEKMAGWLVSVKLALEKRSQRVGGLTADSMTKLFNM
GTDLTRAFEYLLATGNLQSKTGLGMLQNTGLCVVADKLNFIRYLAHFRCVHRGAAFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAHCEIVAPVYSTTTLPSLLCSLGVTAA
DGNPGQPYSDCYPVILDGAMIGWVEKEVAPSVVESLRRFKVLGERKIPPWTEIVLVPQTG
KASMYPGLYLFTTPSRMVRPVRNLGLGKQELIGTFEQVFLNVGILEEELEEGVTTHQELF
PHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQERSDNKLYRLQTPQSPLV
RPAMYDHYNVDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKSDLIDLS
DKVKGDDSIVFGVKPGDPKVMDRLDADGLPFIGSMLKYGDPYYSYINLNTGQSYVTFYKY
QESCIVDNIKVCSNDTGTGRFKRICITCRVPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMCPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEESSALEHFG
EMLKAGGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKLTN
QPLGGRTVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEK
PPPHWSNTRHRKTICLLCNKSDSIETVSVPYVFRYFVAELAAMNVKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaacaagtggtgtaatctaaaatccgaaccgagtttaaaaaacctgacagaa
gcagggttcggtgtcccaaaggaaaaacagcacgttcccgtgcaggaactggtgaaggcg
cacattgagtcctttgatcaggcagttactgatggattatgtcgggttgtggaggctatt
cctcctatggagttcatgtacaagggagacagaatcagtctgtcgtttgtggaggccatc
attcacacgccagcagtttctaaaggaggaatcagcaaagacctaagggtcttccctgct
gaatgcagaggcaggcgctgtacatacaaaggaaagctagtggcagatgtgagttggtct
attaatggcattcccaaaggaatcatcaaacagtctctgggtcaagtgccgatcatggtc
aaatcgaaactttgcaacctttatggtctttcacccaaagaactcattgagcatcacgaa
gaagctgaggaaatgggcggctatttcatcgttaacggcatagagaaggtgattcgtctt
ctgatcatgccgaggaggaactatcccatcacagtatctagacctaagtttaagagcagg
ggacagggctacactcagtacgctatttcaatgtactgcgtaagagatgaacacacatct
attaacatgaatcttcactacctggacaatggaacggtgatggtgaatttcatttacaag
aaggagctgttctttctgcccttgggctttgcactgaaggctctagtggacttctccgat
taccagatttaccaggagctgattaaaggtcgagaggacaactctttctttaaaagttgt
gtctcagaaatgctgcgtatggtcatggaccagggctgcatgactaaagccaaggtgctc
aattacctgggcgagcgtttccgggtcaagctcaacctcccagagtggttcactcacgag
cagtgcgctcacttcctgttagatgaatgtctctgtattcacctgaagtcagatgtggag
aagttttacatgttatgtctgatgacacggaagctcttcacctttgccaagcaggagtgt
atggaggaaagccctgacagtctgatgttccaggaggttctgacaccaggccggttctac
ctcatgttcctaaaagagaaaatggcaggttggttggtatctgtaaaactggccttggaa
aagaggagtcagagagtgggaggactgactgcggatagtatgaccaaactcttcaacatg
gggacagatctcaccagagctttcgagtatctgttagccacaggaaacctccagtctaag
acaggtctgggcatgctgcagaacactggactgtgtgtcgtggcagataagctgaacttc
atccgttacctcgctcatttccgctgcgtgcacagaggagccgccttcgccaagatgagg
accacttctgtgagaaagctgctgccggagtcctggggtttcctgtgtccggtacacact
cctgacggagaaccgtgcggccttatgaaccacatgacagcccactgtgagattgtggct
ccagtatattccacaacaaccctgccttccctgctctgctctctgggtgtaactgcggca
gatgggaaccccggtcagccatattcagattgttatcccgtcatactggacggggccatg
attggctgggtggaaaaagaagtggcaccatcagttgttgaatcccttcgcagatttaag
gtactgggagagagaaaaattccgccctggactgagatcgttctggttcctcagacgggt
aaagccagcatgtatcctggcctctatctgtttaccacacccagtcgcatggtgcggccc
gtccggaacctcggcctgggcaaacaggagcttattggcacctttgagcaggtgtttcta
aatgtggggatcttggaggaagagctagaggagggagtgaccacacatcaagagctgttt
cctcacagcatgttgagtgtggtggccgaattcatccctttctcagatcacaatcagagc
cctagaaatatgtaccagtgccagatgagtaaacagacaatgggcttcccgctgcattcg
taccaggaacgatctgacaataaactgtaccgtctacagaccccccagagtcctctggtc
agacctgcgatgtacgaccactataacgtggataattaccctattggcaccaatgccata
gtggctgtcatttcttacactggctatgatatggaagacgctatgattgttaataagtcc
tcatgggagcgtggctttgctcacggttcggtttataagtctgacctcatagacctgtct
gataaggtcaaaggtgatgacagcattgtgtttggggtgaagccaggtgaccccaaagta
atggacagactggatgcagacggactgccgtttatcggctccatgctgaagtatggagac
ccttactacagctacatcaatctgaatactggccagagttacgtgactttttacaagtac
caggagagctgtattgtggacaatatcaaagtgtgcagtaatgacacgggaactggccgc
ttcaagcgcatttgtatcacatgccgcgttcccagaaaccccaccatcggagacaaattc
gccagcagacatggtcagaagggaatcctgagccgcctgtggcccgcggaggacatgccc
ttcaccgagagcggcatgtgcccagacatcctgttcaacccgcacggcttcccctctaga
atgaccatcgggatgctgatcgagagcatggctggaaaatcggccgccctccacggcctg
tgtcatgatgccacaccattcaagttctcagaggagagctctgcgctcgagcacttcggc
gagatgctgaaagctggcggatacaactactacggcacggagcgactctactccggcatt
agcggcttggagctcgaagcggacatcttcatcggtgtggtttactaccagcgcttgcgt
cacatggtctccgacaagttccaggtgagaactacgggagctagagataaattgactaat
cagccgctgggtggaaggaccgttcagggaggaatccgcttcggagagatggaacgggac
gcactgctggctcacgggacctcgttcctgcttcacgaccggctgtttaattgctcggac
cgctccgtggcgcaggtttgcatggactgcggtagcctgttgtcgccgcttctggagaag
ccgcctcctcattggtcaaatacacgccatcggaaaaccatctgcttgctgtgcaataag
agcgactctattgagactgtgtccgttccttatgtgtttagatactttgtggcagagctt
gcggcaatgaacgttaagatcaaattagatgtcaagtaa
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