Labeo rohita (rohu): 127177165
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Entry
127177165 CDS
T09007
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127177165 (slc6a4a)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127177165 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127177165
NCBI-ProteinID:
XP_050985220
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Position
15:complement(25439632..25458453)
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AA seq
704 aa
AA seq
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MCHFSRTLCIGMTGVQGSPCTLHPSLLRSKPGPSSPGSLSPHGRDISQCKRTTVSTLTAV
LTMEMKQPMMMNREQEKEQESQENGRLVADSVAEKGQKSCSGPGQVSNGYPSTSPQSPRD
GAGAGTDRGGTPGTFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICY
QNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICIIAL
YIAFYYNTIMAWALYYLLSSFRATLPWTTCDNKWNTPNCTHYLSTDLNVSWTNSSISPAE
EFYIRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFPY
LVLLILLIRGATLPGAWKGVVFYLKPDWRKLLTTSVWLDAAAQIFFSLGPGFGVLLAFAS
YNPFHNNCYKDALVTSSVNCLTSFLSGFVIFTVLGYMAEMRRQDVETVAKDAGPSLLFII
YAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGL
VCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQLML
GFAPGVFWRVCWVAICPCFLLFIIGSFLAVPPEVKLFDYLYPFWTTVLGYCIGVSSFICV
PSYMVYHLLTTKGTFKQRLLKSITPEPPGSSGPQRDTIVITNAV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatttctcaagaacactttgtataggaatgacaggggttcagggctctccttgc
actctccatcccagcctgctccgttccaaacccggcccctcttctccaggctctctatcc
cctcatgggcgcgatatcagccagtgcaagaggaccaccgtctcaaccctaacagccgtc
ctcaccatggagatgaaacaaccaatgatgatgaatcgagagcaggagaaagaacaggag
tcgcaggaaaacggaaggctggttgcggacagcgttgcggaaaaggggcagaaatcctgc
tccgggcctgggcaggtctctaatggttatcccagcacatccccgcaaagccccagggat
ggcgcgggtgctgggacggacaggggtggcacccctgggacattcaggactctggtggtt
cagcagaccagcttggatccacctagggagacttggagcaaaaagatggacttcttgctg
tcggtgatcgggtatgcggtggacctgggcaatgtgtggcgcttcccttacatctgctac
caaaacggagggggtgcctttcttctgccgtacctcctgatggctgtgttcggtggcgtg
ccgctgttctacatggaactggctttgggccagtttcaccgcagcgggtgtatctccatc
tggaaacacatctgccccatcttcaagggtataggcttcgccatctgcatcattgcactc
tacattgccttctactacaataccataatggcctgggctctctactacctcctgtcctcc
tttcgtgccacgctgccctggaccacctgcgacaacaagtggaacactcccaactgcacc
cactacctgtccaccgacttgaatgtctcctggaccaacagctccatctctcccgctgaa
gagttctatatacggcaggtcttgcaggttcatctgtcgcctggtcttcatcagttgggc
tgggtgagctggcagctagccctctgtctgttgttcatcttcactgttgtgtacttcagc
atctggaagggggtcaagacctccggcaaggtagtctgggtgacggctacctttccgtac
ctggtgttgctgatcctgttgataagaggggccactctgccgggagcatggaaaggagtg
gtcttctacctgaaacctgattggcgcaaacttttaaccacttcagtttggcttgacgca
gctgcacagatcttcttctctttgggtccaggctttggcgttctcctggcctttgccagc
tacaatccctttcataacaactgctacaaagatgcattagtcacaagctcagtgaactgt
ttgaccagtttcctgtcaggctttgtaatcttcacagttttgggctacatggcagagatg
cggcgacaagatgtggagactgtagctaaagatgctggtcccagtctgctgttcatcatc
tatgctgaggctattgccaatatgccggctgctacgttcttcgccatcatattcttcctc
atgataattatgctggggctggatagcacgtttgcaggtctggaaggggtaattacagcc
atgttggacgagttcccccacctgttggccaggaggagagaatggtttgtgctcggccta
gtgtgtgtctgttatctgggcgccctctccactcttacctacggaggtgcgtttgtcgtt
aaactatttgaggagtatgccacgggccctgctgttatcaccgtagtcttcctcgaagtc
attgctgtttcctggttctatgggacgacacgtttctgcaacgacgtgcagctgatgctt
ggctttgctcctggtgtgttttggagggtctgctgggtagccatctgcccctgtttctta
ttgttcattattgggagtttcctggcagtccctcctgaggtaaagctgtttgactacctg
taccctttctggaccacagttctcggctactgtattggagtctcctccttcatctgtgtg
ccttcttacatggtctaccatctactcaccaccaaagggaccttcaaacagcgtctgcta
aagagcattacccctgagcctccagggtccagcggccctcaaagagacacaattgtcatc
accaacgccgtgtga
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