Labeo rohita (rohu): 127178071
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Entry
127178071 CDS
T09007
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03250
Viral life cycle - HIV-1
lroh03260
Virion - Human immunodeficiency virus
lroh04060
Cytokine-cytokine receptor interaction
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127178071 (cd4-1)
03260 Virion - Human immunodeficiency virus
127178071 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127178071 (cd4-1)
04514 Cell adhesion molecules
127178071 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lroh04090
]
127178071 (cd4-1)
CD molecules [BR:
lroh04090
]
Proteins
127178071 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
V-set_CD47
Sp38
TM_ErbB1
EphA2_TM
Protocadherin
Phage_tail_L
Motif
Other DBs
NCBI-GeneID:
127178071
NCBI-ProteinID:
XP_050986668
LinkDB
All DBs
Position
16:complement(22772613..22789576)
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AA seq
477 aa
AA seq
DB search
MMLCWILISLFVGFIKAQEVIYAQLGGTVTLPREKVEGNADSVYVNWFRGSDPNPAISKN
PQSGIQKEKEIKTHAHLLDDFSLQISPVQDFDFVIWRCEQHELQKTSKKTYKLYHVTIPK
VSAVMVGAFLSLQCNVDDSSVIPEVKWIAPKNSDCNPGKYDKVKETVTITNVDRCHSGVW
TCKLKYGGKETKATTAVFVIDLSPPIPDTIYTSPLTSSSTVKIPCSLYSNIPWLDLNETG
LRGGSWSFTPLSDPPSTHPLLNLNIGPVVRWDVVNGTDGIPTIEGRELKDQDLSIHNLRV
SEKIRGNYTCSLKFKSKILSRTVKVEVLKILSSEGSRVYEGKSVNLTCTLGHQQTSDFKV
KWNCSSCSFVSSLGPSHPFTLLIPELKVKDSGRWTCELWKGKNKLTSAVLSLKIEKPPVN
IWLIVAICGGVVGFILLIVIIIMCIRRHRQMMMYRRRKTKFCCCKNPQQNQKGFYKT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgtgttggatactaatatcgctgtttgttggatttattaaagcgcaagaagta
atttacgcacagttaggagggactgttaccctaccaagagagaaggtagaaggaaatgca
gatagtgtttatgtgaactggttccgtgggtcagatccaaacccagctatctcaaagaat
cctcagagcgggatccaaaaggagaaagaaattaagacacatgcccatctgctggatgat
ttctctctccaaatctcaccagtacaggattttgattttgtaatttggcgctgtgaacaa
catgaattacagaaaacttcaaaaaagacctacaaactgtaccatgtcactatacccaaa
gtgtcggctgtgatggttggtgcctttctgtctctgcaatgtaatgtggacgatagttca
gttattcccgaagtaaaatggatcgcacctaagaactcagattgtaatccaggaaaatat
gacaaagtaaaagaaacagttaccatcacaaatgttgataggtgtcatagtggtgtttgg
acatgcaagttgaagtatggtggaaaagaaaccaaagcaacaacagctgtttttgtaata
gacctctcccctcccattccagataccatttatacctcacccttgacctcgtcctctaca
gtgaagattccttgttccttgtattctaatattccctggttggacttgaatgaaactggc
ctcagaggtggtagctggagcttcacgcctctcagcgaccctccatcaacacatcctctc
ctcaacctcaacattggtccggttgtcagatgggacgtcgtaaatggcacagatggtata
cctaccatcgagggaagagagctgaaggaccaggatctatcgattcataatctgcgtgta
tcagagaagatcagggggaattacacctgtagcctgaagttcaaaagcaagatcctgagc
aggaccgtcaaggtggaggttctgaagattttatcttctgaaggttctcgagtatatgaa
gggaaaagtgtaaatctgacatgcacattgggacatcagcagacttcagactttaaggtg
aaatggaattgctcgtcttgctcctttgtttccagtctcgggccttctcatccatttact
ctgttgatccctgaactgaaagtgaaggacagtgggagatggacatgtgaactctggaaa
ggcaagaacaagctgacatctgctgtgctatcattaaagattgagaaacctccagtgaac
atctggcttattgttgccatatgcggtggagtcgtgggcttcatcttgctcattgtgatc
atcatcatgtgcattcgcagacacagacagatgatgatgtacagacgacgcaaaaccaaa
ttctgctgctgcaaaaatccccagcagaatcaaaagggattctacaagacgtga
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