Labeo rohita (rohu): 127178297
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Entry
127178297 CDS
T09007
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127178297 (ntrk1)
04020 Calcium signaling pathway
127178297 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127178297 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127178297 (ntrk1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127178297 (ntrk1)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
127178297 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRRCT_2
ig
LRR_8
LRR_5
C2-set_2
TrkA_TMD
Haspin_kinase
CFC
Motif
Other DBs
NCBI-GeneID:
127178297
NCBI-ProteinID:
XP_050987032
LinkDB
All DBs
Position
16:5841328..5880737
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AA seq
797 aa
AA seq
DB search
MADRMVAPVVVMLLVLVAPALSGCPSACRCSFAMLQCLEPDGITSIPALAAQESENVTEI
YIESQANLENITDVDLANYRELKNLTVTYCGLVYISENAFQHNFKLQYVNLASNSLVHIS
WRVFQSVPLLSLILRDNPLTCSCDIYWLQQWHRKRQSDIDSQQNCMYNGNNIQLDSFEMD
NCSIPEVIIHPSTLTTQKGGNLTFTCLVTGVPTPTIRWRTEHLQSNWTLQRGIWGSSLEL
ILYMRNVSSGDNLHNLTCEAENRAGMGEAVVQLDIEFPVRILFLKDPESQHHWCFPFAVD
SNPPATIKWLYNNTPLIETRYAYTELIRDAADGSVQHGCLFLNKPTHLNNGNYTLIVENK
LGRDQATANGKFMDNPFDPLDPEGIIPVLADDPTAPTNQSTETVKMENRVFAVSVPVGLA
VFACTFLVIMVVVINKCGQHSKFGIHRSSVLGTEDDLAVSLRFMNFGASPPSSDDGTLDS
GLSSFVENPQYFCGIIKDKDMCVQHIKRKDIVLKWELGEGAFGKVYLAECANLCPDTDKM
LVAIKTLKVANESTRQDFQREAELLTVLQHEHIVRFYGVCTDGEPLAMVFEYMRHGDLNR
FLRAHGPDARILDEMKVPLMGQLTLPQMLQIAAQIASGMVYLASLHFVHRDLATRNCLVG
EGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVLWE
IFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHLLMQGCWQREPQQRLVIKDIYN
RLVALVKNPPVYLDILE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccgtatggtggccccggttgtggttatgcttctcgtcctggtcgcaccagcc
ctgagcggatgcccgagcgcctgccgctgctccttcgccatgcttcaatgcctggagccg
gacggaatcaccagcatccctgcgctagcggcgcaggagagcgaaaacgtcactgaaatc
tacatagagagtcaagccaacctggagaacatcacagatgttgacctcgccaactacaga
gagctgaagaacctgacggtcacatattgtgggttggtgtacatctctgaaaatgccttc
cagcataatttcaagctgcagtatgtaaacctggcctctaattcactggtgcacatcagt
tggagggtgtttcaatcagtccctctgttgagtctaatcttgagggacaatccgctcacc
tgctcatgtgacatttactggcttcagcagtggcacagaaaaagacaaagcgacattgat
tctcaacaaaactgcatgtacaatggcaacaacattcagctggattcatttgaaatggat
aactgcagtattcctgaggtcataattcatccatctacactaaccactcaaaaaggtgga
aatctgacatttacctgtctggtgaccggagtaccaacaccgacgatccgctggagaaca
gagcatctacagtccaactggaccctgcagcgagggatctggggatcaagcctggagctg
attctctacatgaggaacgtgtcgtctggagacaatctgcacaacctcacctgtgaggcg
gagaatcgcgctggaatgggagaagccgtggtgcagctggacatcgaatttccagtgcgg
atcttgtttctaaaagacccagagtcacaacatcactggtgtttcccattcgctgtggac
agcaatcctcccgccaccatcaaatggctgtacaacaacacgcctctcatcgaaacacgc
tacgcctacaccgaactgatccgagacgcggccgacggctccgttcaacacggctgcctg
ttcctcaacaagccaacgcacctcaacaacggcaactacacgctcatcgtggagaataaa
ctgggtagagaccaggcgacggcaaacgggaagttcatggacaatccttttgacccctta
gacccggagggcatcattcctgttcttgccgatgacccaacagctcccactaaccagtca
acagagacggttaaaatggagaacagagtgtttgcggtgtcagtaccggtgggtctcgct
gtgtttgcgtgcacatttctggtcatcatggttgtcgtcatcaataaatgtggacagcac
tccaagtttggcatccaccgttcatctgttctaggcacggaggatgatttggccgtatct
ctccgcttcatgaactttggtgcaagtcctccgtcttcagatgacggcacgctggattct
ggtttgtccagctttgtagagaacccgcagtacttctgtggcatcatcaaagataaagac
atgtgtgttcagcacattaaaagaaaagacattgttttgaagtgggaactgggtgaggga
gcttttggcaaggtttacctggcggaatgtgccaatctctgtcctgacactgacaagatg
ctggttgctatcaagactttgaaagtcgccaacgagtccacccggcaggacttccagcgc
gaggctgagctgctcacggtgcttcagcatgaacacatagtgcggttctatggcgtgtgt
acagacggagaacctctggccatggtgtttgagtacatgcgacacggagacctcaaccgc
tttctaagggctcacggtccagatgctcgtatcctggatgagatgaaggttcctctgatg
ggtcagttgactcttcctcagatgctccaaatcgcagctcagatcgcctcgggaatggtg
tacctcgcttcccttcatttcgtccacagagacctggccaccaggaactgtttggtcgga
gaagggctggtggtgaagatcggggactttgggatgtcgagagacatttacagcactgat
tactacagggttggtgggaggacgatgctgcccattcgctggatgccaccagaaagcatc
atgtacaggaagttcaccacggagagtgacatctggagctttggagttgtcctttgggaa
atcttcacctacggcaaacaaccatggtatcagctatccaacagtgaggccattgagtgc
atcacacagggcagagagcttgaacggccacgtacctgcccgaaggaagtgcatctcctc
atgcagggctgctggcagagagaaccgcagcagaggctcgtcatcaaggacatctacaac
cgcctcgtggccctcgtcaagaacccacccgtctatctggacatcctggagtag
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