Labeo rohita (rohu): 127182395
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Entry
127182395 CDS
T09007
Symbol
si:ch211-264f5.6
Name
(RefSeq) carcinoembryonic antigen-related cell adhesion molecule 5
KO
K06499
carcinoembryonic antigen-related cell adhesion molecule
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127182395 (si:ch211-264f5.6)
04147 Exosome [BR:
lroh04147
]
127182395 (si:ch211-264f5.6)
04090 CD molecules [BR:
lroh04090
]
127182395 (si:ch211-264f5.6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
127182395 (si:ch211-264f5.6)
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127182395 (si:ch211-264f5.6)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127182395 (si:ch211-264f5.6)
Exosomal proteins of bladder cancer cells
127182395 (si:ch211-264f5.6)
CD molecules [BR:
lroh04090
]
Proteins
127182395 (si:ch211-264f5.6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lroh00537
]
Antigens
127182395 (si:ch211-264f5.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
V-set
Ig_5
Ig_4
C2-set_2
Izumo-Ig
V-set_CD47
Adeno_E3_CR1
Podoplanin
C2-set
Lep_receptor_Ig
DUF4690
Syndecan
Motif
Other DBs
NCBI-GeneID:
127182395
NCBI-ProteinID:
XP_050993647
LinkDB
All DBs
Position
19:complement(30166780..30185070)
Genome browser
AA seq
537 aa
AA seq
DB search
MDFFNFRLPLLILAALGCYSEGSPLLNNKINGVIGKYVTFKTTVILTPNFVTVTWNFNDG
SKIAPIITSIVPSNTDNVDEKYAGRISYNKTTFELQLGPLVKEDGGEYTLTIVTDKGQQL
TGQVDLEVLEPVTDVMILSNPPEAVEFNSTVNLTCSAKGSFTYKWMNGSVPLVVDGTHIK
LNQVGNVLTIAEVRRTDLRGPIFCIAENPLESGRSAAFNLTVSYGPEKVNMTQTPTDSFL
KKGSNLTFSCLAQSDPPAQLLWKFNGEELPQKTTASLTLTNVQEINSGNYSCVAYNMKTK
RYVSSQITVVSVLEALSGTNISSSSSVLIDGYSTVNITCSAAAGKAESVEWLKGDKPLTP
SERVILSADKKTLTIVKVVKEDAGDYKCQLKNKVNKDESTYKMVINYGPLNVKVEGKNAV
KFEEPAKLLCFADSVPISKYSWKLNGTVMNISQAEINIEKAKVTDSGIYTCEAFNPITGK
TETKTHKLAVTEVGAVDEGLSGGAIAGIVIGVLVAVIIIACIIKRKKKANSDIPSPY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggatttctttaactttaggctgcctttgcttattttggctgctcttggatgctattcc
gagggcagtccgcttctcaataacaaaatcaacggcgttataggtaaatatgtgaccttc
aagacaacagtcatcttaacaccgaattttgtaaccgtaacatggaatttcaacgatggt
tcaaaaattgcaccgataattacgagcattgtgccatcaaacaccgacaacgttgatgag
aaatacgccggcagaatcagctacaataagacgacgttcgagcttcagcttgggccactg
gtgaaggaggatggaggggaatatactctcactatagtcactgacaagggacagcaactg
accggacaggttgatcttgaggttcttgaacccgtaactgacgtcatgattttgtccaat
ccgcctgaagctgttgagtttaacagcaccgtgaatcttacctgctctgccaaaggctcc
tttacctacaagtggatgaacggttcagttcctttggtggtggatggcacacacataaaa
ctaaaccaagtcggcaatgtgctaactattgcagaagttcgccgtacagatctgcgagga
cccattttttgcattgcagaaaacccgctggagtcagggaggagcgctgccttcaatctc
accgtgagctatggcccagagaaagtcaacatgacacaaactccaacagattcattcctt
aagaaaggctccaacttaaccttttcatgcttagcccagtctgaccctcccgcacagctc
ctttggaagtttaatggtgaggagctacctcagaagaccacggctagccttaccctcacc
aatgtacaggaaataaacagtggaaactatagctgtgtggcctacaacatgaagaccaag
cgctacgtttcctcgcagatcactgtggtgtctgttctggaggccttatctggaacaaat
atctccagctcctcatcagttctcattgatggctacagtacagtcaacatcacctgctcg
gcagcggctggaaaagccgaaagcgtggaatggctgaagggcgacaaacctctgacccct
agtgaacgtgtcattctctcagctgacaagaaaactctgaccatcgttaaagttgttaaa
gaggatgccggtgactacaagtgccaactgaagaacaaagtcaacaaagatgaaagcacc
tataagatggtgatcaactatggtccactgaacgtgaaagttgaagggaagaatgcagtg
aagtttgaagaacctgcaaaattactctgctttgcagactctgttcctatcagtaaatac
tcatggaaactcaacggtacagtgatgaacatcagccaggcagaaattaatattgaaaag
gccaaagtcacggacagtggcatctacacctgtgaggcgttcaaccccatcacgggaaaa
acagaaacaaagacacacaaacttgcagtcacagaggttggtgctgtagacgagggcctg
tctggtggagcgattgctgggattgtaattggcgtgcttgtggccgtgataatcatcgct
tgtattataaagcgcaagaaaaaagcaaactcagacattccatctccatattaa
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