KEGG   Labeo rohita (rohu): 127182449
Entry
127182449         CDS       T09007                                 
Symbol
polr2ea
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03020  RNA polymerase
lroh03420  Nucleotide excision repair
lroh04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127182449 (polr2ea)
  09124 Replication and repair
   03420 Nucleotide excision repair
    127182449 (polr2ea)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    127182449 (polr2ea)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lroh03021]
    127182449 (polr2ea)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127182449 (polr2ea)
Transcription machinery [BR:lroh03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127182449 (polr2ea)
  RNA polymerase III system
   RNA polymerase III
     127182449 (polr2ea)
  RNA polymerase I system
   RNA polymerase I
     127182449 (polr2ea)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127182449 (polr2ea)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 127182449
NCBI-ProteinID: XP_050993694
LinkDB
Position
2:37702576..37707200
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKGQFGDRPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEMKVGIKTIKMYCQRMQEENIARAIIVVQTGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVTELLARYKLKETQLPRIQSGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaggaggagacttatcgattatggaaaatccgtaagaccataatgcagctc
tgccatgatcgaggatatctggtgacccaagatgagctggaccagaccttggatgagttc
aaaggtcagtttggtgacagacccagcgagggtcgacccagacggacggacctcaccgtg
ctggtggcccacaatgacgaccccaccgaccagatgtttgtgttctttccagaggagatg
aaagtgggcatcaagaccattaagatgtactgccagcggatgcaggaagaaaacatcgct
cgggccattatcgtagttcagacgggcatgacgccttctgctaaacagtcgttggttgat
atggcaccaaaatacatcctggaacagtttctacagcaagagctgcttataaacatcaca
gagcatgagttggttcctgaacacattgttatgacaaaagaggaagtaacagagctgctg
gccagatataaactcaaggagacacagttacccagaattcagtctggagatcccgtggca
cgatatttcgggctgaaacgaggacaggtggtgaagatcatccgacccagtgaaacggct
ggacgatacatcacatacagactcgtacagtga

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