Lynx rufus (bobcat): 124522439
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Entry
124522439 CDS
T08475
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00310
Lysine degradation
lruf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124522439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124522439
03036 Chromosome and associated proteins [BR:
lruf03036
]
124522439
Enzymes [BR:
lruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
124522439
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124522439
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124522439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
124522439
NCBI-ProteinID:
XP_046949870
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHGGSGGPLKGGGAAGPLGAPQPLQPPPPPPPP
ERAEPPPDSLRPRPASLSSASSTPASSSNSASSASCAAAAAAAAAALAGLSALPVAQLPV
FAPLAAAAVAAEPLPPKDLCLGAASGPGPSKCGGGSGVDARGAPRFRCSAEELDYYLYGQ
QRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPELPEW
LRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGAVRNTQHLWE
IYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTEL
LVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDALQPFTKSSKLPPAAQQRSVV
FPQTPCSRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHSEFSDWHLWKCGQCFK
TFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAG
ATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPESIEVD
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggctcggccttcctcaaagtggatccagcctatttg
cagcactggcagcaactcttcccgcacggcggcagcggcggcccgctcaagggcggcggc
gccgcgggtcccctgggcgcgccgcagcccctccagcccccgccgccgccgccgcccccg
gagcgcgcagagccgccgccggacagcttgcgcccgcggcccgcttcgctctcctccgcc
tcctccactccggcttcctcctccaactcggcctcctctgcctcctgcgccgccgccgcc
gccgccgccgccgccgcgctggcgggtctctcggccctgcctgtggcgcagctgccggtg
ttcgcccctctggccgccgccgccgtcgccgcggagccgctgccccccaaagacctgtgc
ctcggcgccgcctcgggcccggggccttccaagtgcggcggaggcagcggcgtggacgcc
cggggcgccccgcgcttccgctgcagcgcggaggagctggactattacctgtacggccag
cagcgcatggagatcatcccgctcaaccagcacaccagcgaccccaacaaccgttgcgac
atgtgtgcggacaaccgcaacggcgagtgtcccatgcacgggccgctgcactcgctgcgc
cggctcgtgggcaccagcagcgccgcggccgccgcgcccccgccggagctgcccgagtgg
ctccgggacctgccgagggaggtgtgcctgtgcaccagcactgtgccgggcctggcctac
ggcatctgcgcggcgcagaggatccagcagggcacctggatcgggcccttccagggcgtc
ctcctgcctccggagaaggtgcaggccggcgctgtgaggaacacgcagcatctctgggag
atatatgaccaagatggaacactacagcactttattgatggtggggaacctagtaagtcg
agctggatgaggtatatccgatgtgcaaggcactgcggagaacagaatctaacagtagtt
cagtacaggtcgaatatattctaccgagcctgtatagatattcccaggggtaccgagctt
ctggtgtggtacaatgacagctatacgtctttctttgggatccctttacaatgcattgcc
caggatgaaaacttaaacgtcccctccacggtcatggaggccatgtgcagacaagacgcc
ctgcagcctttcaccaagagcagcaaactgcccccggccgcccagcagcgttctgtggtt
ttcccacagacgccgtgcagcaggaacttctctctcctggataagtctgggcccatggag
tcaggatttaaccaaatcaacgtgaaaaaccagcgagtcctggccagcccgacctccacg
agccagctccactcggagttcagtgactggcacctttggaagtgcgggcagtgctttaag
actttcacgcagcggatcctcttgcagatgcacgtgtgcacgcagaaccccgacagacct
taccagtgtggtcactgctcgcagtccttttcacaaccatcagagctgaggaaccacgtg
gtcactcactccagtgaccggcccttcaagtgcggctactgcggtcgtgccttcgccggg
gccaccaccctcaacaaccacatccgaacccacactggagaaaagcccttcaagtgcgag
aggtgtgaacggagcttcacgcaggccacgcagctgagccggcaccagcggatgcccaat
gagtgcaagccaataactgagagcccagaatcaattgaagtggattaa
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