Leifsonia shinshuensis: F1C12_01325
Help
Entry
F1C12_01325 CDS
T06806
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lse
Leifsonia shinshuensis
Pathway
lse00900
Terpenoid backbone biosynthesis
lse01100
Metabolic pathways
lse01110
Biosynthesis of secondary metabolites
Module
lse_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lse00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
F1C12_01325
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lse01006
]
F1C12_01325
Enzymes [BR:
lse01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
F1C12_01325
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
F1C12_01325
2.5.1.29 geranylgeranyl diphosphate synthase
F1C12_01325
Prenyltransferases [BR:
lse01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
F1C12_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QNE33917
UniProt:
A0A7G6Y602
LinkDB
All DBs
Position
complement(264042..265163)
Genome browser
AA seq
373 aa
AA seq
DB search
MSESIRFVDLIQSRIDGFFDARASILVSIADELSPIAAFSRDFLSGGKRFRALFCFWGWQ
AVRTAGDEPGEDAAVTAGGPLDAVVSVASALELFHAAALVHDDLIDNSDTRRGAPSAHRR
FERLHDQEGWQGSGAAFGTGAATLLGDYLLILSDELFDEGLTQTVSAAARRSARAEFNRM
RLDVTAGQYLDIFEEIGWAGRPDADQLARAERVIVYKSAKYSIESPLLIGASLAGATVGQ
LDALRRFGLPLGIAYQLRDDLLGVFGDAEVTGKPSGDDLREGKRTVLIALTRQAVPAGAR
ATLDELLGDPDLTPQQIQTLQMTIRDSGAVEKVERMIADNVASAIEALDEAPIGPAARAQ
LRELAVTVTRRAS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaagcatccgattcgtcgacctcatccagtcaagaatcgatggattcttcgat
gcgcgtgcatccattctcgtctccatcgccgatgaactctccccgatcgcggctttttcg
agggattttctcagcggcgggaagcgcttcagggcgttgttctgcttctggggctggcag
gcggtccggacggcgggtgatgagccgggcgaggacgcggccgtgaccgccggcggcccg
ctcgacgcggtcgtctccgtcgcctccgcgctggagctgttccacgccgccgcgctcgtg
cacgacgacctcatcgacaactccgacacccgccgaggggctccctccgcgcaccgccgc
ttcgagcggctgcacgaccaggagggctggcagggctcgggcgccgcgttcggaacggga
gcggcgacgctgctcggcgactacctgctcatcctcagcgacgagctcttcgacgaaggc
ctcacccagaccgtcagcgcggcggccaggcggtcggcccgggcggagttcaaccggatg
cgcctggacgtcacggccgggcagtacctcgacatcttcgaggagatcggctgggccggg
cgcccggacgccgaccagctcgcccgagccgagcgggtcatcgtctacaagtcggccaag
tactcgatcgagtcgccgctgctgatcggcgccagcctcgccggcgcgacggtcggccag
ctcgacgccctccgccgcttcggcctccccctcggcatcgcgtaccagctgcgcgacgac
ctgctcggcgtcttcggcgacgcggaggtcaccggcaagccgagcggcgacgatctgcgc
gagggcaagcggaccgtcctcatcgcgcttacccggcaggccgtcccggccggagcgcgg
gcgacgctggacgagctgctcggcgacccggacctgacgccgcagcagatccagaccctc
cagatgacgatcagggactccggcgccgtggagaaggtggagcgcatgatcgcggacaac
gtcgcgagcgcgatcgaagccctcgacgaggcgccgatcgggccggcggcgcgcgcccag
ctccgcgagctcgcggtgacggtcacccgccgggcgtcctga
DBGET
integrated database retrieval system
