Leptidea sinapis (Wood White): 126964783
Help
Entry
126964783 CDS
T09272
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126964783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsin03021
]
126964783
Enzymes [BR:
lsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126964783
Transcription machinery [BR:
lsin03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
126964783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
126964783
NCBI-ProteinID:
XP_050663983
EnsemblRapid:
ENSLSNG00005018426
LinkDB
All DBs
Position
6:5793155..5848137
Genome browser
AA seq
1414 aa
AA seq
DB search
MPKEQYRETYVGRKISHVTFNVDGASDIQLAAQIQVITKNLYAQDGQRVPASYGVLDRRM
GTNQKDANCETCGLGLADCVGHYGYIELALPVFHVGYFRSVITILQTICKHCAKIMLQEP
LKRSYRRKFLNPELSYLHKKSLRAAVLKKAKTCTKCPHCETLNGVVKKSPAGILKIIHDK
YRNKKPGDPIVTRVLMDFNEAKESNKELATMLSSGLIAELSPVEVLNLFRRIPDEDIALL
GMNAKTSRPEDLILTRLPVPPLCIRPSVASDIKAGTNEDDLTMKQSEILLINDVIARHMA
SGGKIELVQEDWDYLQLHCALYINSEMSGIPMSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPEKVFPANLQWLRKLVCNGPDVHPGA
NYVQQRGLNKKFLKYGNREKIAQELKCGDTVERHLVDGDVVLFNRQPSLHKLSIMCHRAR
VQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELLI
AATQDFITGGYLITQRDTFFTKHDAHQLASCLLAGPDATMRIDMPPPAILKPRKLWTGKQ
IFSLIMKPNKKCEVRANLETKGKNYTRNSDLCVQDSYVIIRNSELLCGSMDKSTLGSGTK
NSIFYILLRDWGEDYAVRGMWRLARMASYYMMNRGFSFGISDVTPGAKLIQAKNALLDSG
YSKCDGYILEMEKGTLQCQPGCSMEESLEAVMLSELSSIRELAAKACFRELHPTNAPLIM
AQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFYS
GLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNATGEVVQF
EYGSDSLDPSYMEAADRPVNLARVLLDVRAHSQHQYDYHQDEEPLDGDGIMLAAEETLAL
DDFKNCPQEFKTELLTFLQSIADKVRRLRARYASCGPVARQLERLTLTQLVRFVRVCHDK
YQRSIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASKNIS
TPIITAELVQPHDQEFARRVKGRIEKTTLGEITTYIEEVYLPNSCFLLVRLDAERIRLLC
LEVNVHSIVYSICTSKLKIKPSNIEVVSEWAVRVYAARGKSGGGWLNLALQQLARQLPDV
VVQGLPKVSRAVIAQDDSGHIRYKLCVEGDGLRDVMATYGVDGTKTTSNNILEVYHTLGI
EAAVSTIISEIQGVMAGHGMAVDRRHVALLSAQMCARGEVLGITRYGLARMKDSVLNLAS
FEKTADHLFDAAYYGQRDSIEGVSECIILGVPANIGTGVMQLLHRHEQTTGTTGTTGTAG
TTGTAGTTGTTDPPPCAARQLLFDRPDFHTSIWE
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagagcagtatcgagaaacatatgtgggaaggaaaatatcccatgttactttc
aatgttgatggtgcatcagatatacagctggctgctcaaattcaagtgattacaaagaat
ttgtatgcccaggatggacagcgtgtgccggccagttatggtgtattggatcggcgaatg
ggtaccaatcagaaggatgccaactgtgaaacctgtggcctggggctggcggactgtgtg
ggacactatggctacatagaactagcactgcctgtctttcatgttggatactttaggtct
gtgattacaatattgcagactatttgcaaacactgtgctaaaataatgttacaagaaccc
ttaaaaagatcttaccgtcgcaagtttctgaaccctgaattgtcatacttgcacaagaag
agtcttcgtgcagctgtactgaagaaagcaaagacttgcacaaagtgtccacactgtgaa
acattaaatggtgtggtgaagaagagtcctgctggtattttgaaaataatacatgacaag
tataggaacaagaaaccgggtgatccaattgttacaagggtgttgatggattttaatgaa
gcaaaagaatctaataaggaattagctacaatgttgtctagtggtcttattgcggagctt
agtcctgttgaggttctaaatttgttccgacgcattcctgatgaagacatcgcattgctc
ggaatgaacgctaaaacttcgagaccggaagatctaatccttacaagactaccagtaccg
ccattgtgcataaggcctagtgtagcttcagatatcaaggctggcacaaatgaagacgac
ctcaccatgaaacaatctgagatacttctgatcaacgacgtgatagcgcggcacatggcc
agcggcggtaagatcgagctggtgcaggaagactgggactatctgcagctgcactgcgct
ctctacatcaacagcgagatgtccgggattcccatgtcaatgcagcctaaaaagccaggt
cgaggactagttcagcggctgaagggaaaacaaggccggtttaggggcaacctgtctggc
aagcgtgtcgacttctccagccgcactgtcatctcaccagatcccaaccttcaaatacag
gaggtaggagtgccagttcacgtagctaaaatattgacttaccctgagaaggtgtttccc
gccaaccttcagtggttgaggaaactggtctgcaacggaccagacgtccatcccggagcc
aactatgttcagcagcggggactaaacaagaagtttctcaagtacggcaatagagagaag
attgcgcaggagttgaaatgtggagacaccgtagagcgtcatttggtggatggcgacgtg
gtactattcaacaggcaaccttcgctgcacaagctgtccataatgtgccaccgcgccagg
gtgcagccacaacgcaccttcaggttcaacgagtgcgtgtgcaccccgtacaacgcggac
ttcgacggagacgagatgaacatgcacctcccgcagaccgaggaggccagggctgaagcg
ctcatactcatggggaataaatcaaatctggtgacaccccggaacggtgagctgttgatc
gccgcgactcaggacttcatcacgggcgggtacctcatcacccagcgcgacaccttcttc
accaagcacgatgctcaccagctggccagctgcctgctcgctgggccagacgccaccatg
aggatcgacatgcccccgccggccatactcaagccgaggaagctgtggactggcaaacag
atatttagtttaataatgaaacccaacaagaaatgcgaagtgcgagcgaacttggagacc
aaaggcaagaactacaccaggaacagtgatctgtgtgtgcaggactcgtatgtgataata
agaaattcagagctgctgtgtggatcgatggacaagagcaccctgggctcaggcacaaag
aacagcatattttatattctgctgcgggactggggcgaggactacgccgtcaggggaatg
tggaggttggcgcgcatggcgtcctactacatgatgaaccgcggattcagctttggaatc
agcgacgtgacgccgggtgccaagcttatccaggccaagaacgcgctcctcgactccgga
tattccaaatgcgatggctacatcttggagatggaaaaaggcacattgcagtgtcagccg
gggtgctccatggaggagagcctagaggcggtcatgctgagcgagttgagcagcatcaga
gagttagcggccaaggcgtgcttccgagagctgcatccgaccaatgcgccgctcatcatg
gcacagagtggttcgaaaggatcaaacatcaacatatcgcaaatgatagcgtgcgtcgga
caacaggcactcaatggtaaacgagtgcccaacggcttcgaggacagatccctgccgcac
ttcgagagacactcaaagattccggcggcgcggggcttcgtagagaacagtttctactcg
gggctgactcccaccgagttctttttccacaccatgggaggtcgcgagggcctcgtcgac
accgccgtcaagaccgctgagaccggatacttgcagcggcgacttgtcaagtcgcttgaa
gacctggtccttcactacgacatgacggtgcgcaacgcgaccggcgaggtggtgcagttc
gagtacggcagcgacagtctggaccccagctacatggaggcggccgaccgccccgtcaac
ctggcgcgcgtgctgctcgacgtgcgggcgcactcgcagcaccagtacgactatcaccaa
gatgaagaaccattggacggcgatggcatcatgctggctgccgaagagaccctcgcatta
gacgatttcaagaattgcccgcaggagttcaaaactgaattactaacattcctgcagtcg
atagcggacaaggtgcggcggctgcgtgcgcggtacgccagctgcgggcccgtggcgcgg
cagctggagcggctgacgctcacgcagctggtgcggttcgtgcgcgtgtgccacgacaag
taccagcgcagcattatagagcccggcacggccgtgggcgcgctggcggcgcagagtatc
ggcgagccgggtactcaaatgactctgaagacgttccacttcgcgggcgtggcttccatg
aacatcacgcagggcgtgccgcgcgtcaaggagatcatcaacgcatcgaagaacatctcc
acgccaatcatcaccgccgagttggtacagccgcatgaccaggagttcgccaggagggtc
aaaggacggatcgagaaaacaacattaggagagataacgacgtacatagaggaggtgtac
ttgcctaattcctgcttcctgctggtccgcctggatgccgaacggatacgcctgttgtgt
ctggaggtcaacgtgcattctatcgtatattccatttgcacatcgaagctgaagataaag
ccgagcaacatcgaggtagtgagcgagtgggccgtacgtgtgtatgcggcgcgaggcaag
agcggcggcggctggctcaacctggcgctgcagcagctggcgcggcagctgcccgacgtg
gtggtccaggggctgcccaaggtgtcgcgggcggtcatagcgcaggacgactccgggcac
atcaggtacaagctgtgtgtggaaggggatggcctccgcgacgtgatggcaacatacggc
gtcgacggcaccaaaactacctccaataatattttagaggtgtaccataccctgggcatc
gaggcggccgtgtccaccatcatcagcgagatccagggggtgatggcgggccacggcatg
gcggtggaccggcgccacgtggcgctgctgtcggcccagatgtgcgcgcgcggtgaggtg
ctgggcatcactcgctacggcctggcgcggatgaaggactccgtgctcaacctggccagt
ttcgagaagacagcggaccacttgttcgacgcagcgtactacgggcagcgggacagcatc
gagggcgtgtccgagtgcatcatcctgggcgtgcccgccaacatcggcacgggcgtgatg
cagctgctgcaccggcacgagcagaccactggcaccactgggaccactgggaccgctggg
accactgggaccgctgggaccactggcaccactgacccgccgccttgcgccgccaggcaa
ctgctcttcgacagaccagactttcacacgtccatttgggaataa
DBGET
integrated database retrieval system
