Leptidea sinapis (Wood White): 126979958
Help
Entry
126979958 CDS
T09272
Name
(RefSeq) geranylgeranyl pyrophosphate synthase-like
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lsin
Leptidea sinapis (Wood White)
Pathway
lsin00900
Terpenoid backbone biosynthesis
lsin01100
Metabolic pathways
Module
lsin_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
126979958
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lsin01006
]
126979958
Enzymes [BR:
lsin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
126979958
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
126979958
2.5.1.29 geranylgeranyl diphosphate synthase
126979958
Prenyltransferases [BR:
lsin01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
126979958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Vta1
Motif
Other DBs
NCBI-GeneID:
126979958
NCBI-ProteinID:
XP_050685507
EnsemblRapid:
ENSLSNG00005008036
LinkDB
All DBs
Position
1:1743402..1764347
Genome browser
AA seq
353 aa
AA seq
DB search
MIQDEGECKLYLEKELLSPHNYMLQMPSKDIRVRFAMSFNHWMGLPKEKAQFIVESIQML
HTGSLLMDDIQDNTLVRRTIPSAHLVYGVPLTSNASIHVMTLCLERLLTLGHPMIGQLYC
ENYLEIIRGQGKEIYWRERFQCPSENQYKYTLMQKTGNMFNLAYKVMQLFSDNDKDYTKL
VKHLGLYFQLCDDYWNLVNMEALEELPGADTHNTSVKNNAMNVHKTNGATLEKLHDANKN
NISIKNTIDGASRNGAKVDPRYFCEDLTEGKFTLPIIHAAQQEGGEVVLNILQQHTRDPE
LKKYCVSLLEKLGSIKYTRDKIIELENWIRDQIKNFGGNPDLSSLLDEMTLNL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatacaagacgaaggtgaatgtaaactttatttagagaaggaactcctgtcgcctcac
aactatatgctacaaatgccttccaaagatatacgtgtaagatttgccatgtctttcaac
cactggatgggcttgccaaaggaaaaagcacaattcattgttgagtctattcagatgtta
catactggctcattgctgatggatgacatccaggacaacactttagttcgccgaactatc
ccgtcagcacacctggtctatggagtcccacttacatccaatgcgtcaatacacgtcatg
acactgtgcctggaaagactgctaactcttggacatccaatgatcggacagttgtattgt
gaaaattatttggaaattattcgtgggcaaggaaaagaaatatattggagagaacgattc
caatgtccaagtgaaaatcagtacaaatatacgttaatgcaaaagactggcaacatgttc
aatcttgcctataaggtgatgcagttatttagcgacaatgataaggattacacgaaactc
gtcaaacatttgggattatattttcagctatgtgatgattactggaacttagtgaacatg
gaggcgttagaggaattgcccggtgcagatacacacaatacaagtgttaaaaataatgca
atgaatgtgcataaaacaaacggtgcgacgttagaaaaattgcatgatgcaaataaaaat
aatataagtattaaaaatacaatagacggggcgagtagaaacggtgcgaaagtggatcct
cgatatttctgtgaggatctgacagagggcaaattcactctgccaattattcacgctgct
caacaggaaggcggggaggttgttctgaatattctccagcaacataccagggatccagaa
ctgaagaagtactgcgtgtcactgctagagaaacttggtagcattaaatacaccagagac
aaaattattgaacttgaaaattggatacgagatcagattaagaatttcggtggtaatcca
gatctatcatcacttttagacgaaatgactctaaacctgtaa
DBGET
integrated database retrieval system
