Ligilactobacillus salivarius JCM1046: LSJ_0939c
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Entry
LSJ_0939c CDS
T03340
Symbol
hsdM
Name
(GenBank) Type I restriction-modification system methylation subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
lsj
Ligilactobacillus salivarius JCM1046
Brite
KEGG Orthology (KO) [BR:
lsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lsj02048
]
LSJ_0939c (hsdM)
Enzymes [BR:
lsj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
LSJ_0939c (hsdM)
Prokaryotic defense system [BR:
lsj02048
]
Restriction and modification system (R-M system)
Type I R-M system
LSJ_0939c (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
Eco57I
AviRa
Exonuc_VII_S
Motif
Other DBs
NCBI-ProteinID:
AIR10619
UniProt:
A0A089QC02
LinkDB
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Position
complement(946396..947991)
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AA seq
531 aa
AA seq
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MAQEQEGINLENALFNAADVLRSKMDANEYKNYLLGTIFYKYLSDSMLYYVTELLEEENV
SLEEAQKLYEENQDDPDLIDELNLKFNYVIDAKNTYTNILKTVNNHTFQISQLGDAFNSI
ESQGKEFEGLFDDYDLYSKRLGSTAQKQSDTISGVLSAIGKLEIVKTPGDTLGDAYEYLI
GQFASESGKKAGEFYTPQQVSELLTRLTLVNKDYTDGMTVYDPTMGSGSLLLNFRKYVER
SERITYFGQEINTSTYNLARMNMILHHVDIVNQKLRNGDTLDEDWPIEEITNFDAVVMNP
PYSYKWSANAGFKDDPRFSAYGVLPPKSKADYAFLLHGYYHLKHSGVMAIVLPHGILFRG
AAEGKIRKKLLENGAIDAVIGLPANLFYNTSIPTTIVVLKKDKQDRDVLFIDASKDFKKV
KTQNELRDEDVEKILTTYKERKDIDKYAHLASFDEIKENEFNLNIPRYVDTFEPEPEINL
DEVSKELRETNEKIKENETELISMLKDLTSEDEKIMKGLNDFISVLEEDVK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaacaagaaggaattaatttagaaaatgcattatttaatgcagctgatgta
ttacgttccaaaatggacgctaatgaatacaaaaattatctattaggtacgattttctat
aaatatttatctgatagcatgttatattatgtaactgaattgttagaagaagaaaatgtt
agcttagaagaagctcaaaaattatatgaagaaaatcaagatgacccagatttgattgat
gaattgaatcttaaatttaattatgtgatagatgctaagaatacttatacaaatatttta
aaaactgtaaataatcatactttccaaattagtcaattaggtgatgcttttaatagtatt
gaaagtcaaggtaaggaatttgaaggtttatttgatgattatgatttgtattctaaacgc
ttagggagtactgcacagaaacaatctgatacaatctcaggtgtattaagtgcaattggt
aaacttgaaattgtaaagactccaggtgatactttgggcgatgcttatgaatatctaatt
ggacaattcgcatctgaatcaggtaaaaaagctggtgaattctatacaccacaacaagta
tcagaattattaacaagactaactttagttaataaagattatacagacggaatgacagta
tacgatccaacaatgggatcaggttcattgttattaaacttccgtaaatatgtggaacgt
tctgagagaattacttattttggacaagaaattaatacttcaacatataacttggcacgt
atgaatatgattttgcatcatgtagatattgttaatcaaaagcttagaaatggtgatact
cttgatgaagattggccaattgaggaaataactaactttgatgcagttgtaatgaatcca
ccatattcttacaagtggtctgccaatgctggttttaaggatgatccacgtttttccgca
tatggagttttgccgccaaaatctaaagctgactatgctttcttgttacatgggtattat
catttgaaacatagtggggtaatggctattgttttacctcatggaatattattcagaggg
gcagcagaaggtaaaatcagaaagaaattgttagaaaatggggcaatagacgcggttatc
ggtttaccagctaacttgttctataacacaagtattccaactacgattgtcgttttgaag
aaagataagcaagatcgcgatgtattatttattgatgcttcaaaagattttaaaaaagtt
aagacacaaaacgaactacgtgacgaagatgtagaaaaaattcttacaacatataaagag
cgtaaggatattgataagtatgcccacttagctagttttgatgagattaaagaaaatgaa
tttaacttaaatattccacgttatgtagacacttttgagcctgaaccagaaattaattta
gatgaagtttcaaaagaattaagagaaacgaatgagaaaatcaaagaaaatgaaactgaa
ttaattagtatgctaaaagatttaacttccgaagatgagaagattatgaaaggcttaaat
gacttcataagtgtcttagaagaggatgtgaaatga
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