Lepeophtheirus salmonis (salmon louse): 121115632
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Entry
121115632 CDS
T08214
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B-like
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121115632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121115632
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glutamate (ionotropic)
121115632
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
SBP_bac_3
Lig_chan-Glu_bd
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
121115632
NCBI-ProteinID:
XP_040565648
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Position
1:complement(7329270..7448742)
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AA seq
1117 aa
AA seq
DB search
MIAHDIVYPILLLATTILLPTEGQQQINFSKPISRYRRRGGFKVHLNSPPPQSFSPTPFA
STAYPGGWEDSRNTHFRQPKPYYPASTSSSPTTSYTNLSRNRNSIPQVPYDGKKSDLKVG
IILPKQIFQQRRYQSVIARSIENIAIERSSSAQNLSYFQLVSSRYNFDWKSGLFLLEDQF
DAINFAHMEVSPPPADITTILCDQMASGSSAIIYFTNTEKFGRSTASTQYFLQMAGFLGI
PVIAWNADNSGLETRSNTRIGSKFTGYLQLAPSVAHQVSALLSILDRYNWNQFGIVTSDI
AGHDDFVQAIRDALHQPSRSQYVIQNVFKVSESNNWSVEELTSSEVRIILLYCTQSEASI
IFKKANETGLTSHNYLWLVTQSVIGDPTVRISHRKNLPVGTLGIHFEVDQMKILDKFMSL
ALRVFFTGVESMIVKRNKNFINKGLKCADINDAYRWRQGPDFFRHLLNLTMNIGHEKLSS
FGKQRVFNVDGSLRQTEMKIMNFKPRTQNSGLAWEEVGTWNSWNGLDIKDIVWPGGSHLP
PQGVPEKFYMKITFLEEPPFIILSDPDPISSKCSMNRGVPCYMSEKHLRSHANSSQESTK
CCSGLCIDLLRKFEDEMGFTYDLIRVEDPKWGTIEHGKWNGLMETLVNKKTDLVLSSLKI
NAEREAAVDFTIPFLESGIAIVVAKRTGIISPTAFLEPFDTYSWMLVSMVAIQASAFSIF
FFEWLSPSGYNMQVVPSKSNHRFSLVRTYWLVWAVLFQASVQVDCPRGLTARFMSSVWAL
FAVVFLALYTANLAAFMIPRKEYHDLSGLDDRRISNPLSQKPALKFGTLPYSYSQVTLQK
HYSSMFSYMRPFNRYNNTEEAIRAVKTGKLDAFIYDGTVLNYLVSQDEECRLLQVGSWSG
MTGYALAFPQHSKFKAMFNQKILELRENGDLERLSRYWMSGSCNPNEQEKKASEPLSISQ
FLSAFLLLGIGMCLSVIFLILEHLYMRYLQNHLHKTKASGCFSLISLSIGKSAAAEKNNL
SASKIGSGESSNVLDDESRELNGPTTIMTSLTRNSEGVESCLSKGCGDNYCNIKLFHLEN
ELIIARERIVEMEEQLQICGGILKSKRKEMEEKETVL
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgattgctcatgatattgtctaccctattcttctcctcgccactacaatcttgttacct
acagagggacaacaacaaattaatttttcaaaaccaatttccagatatcgccgccgtgga
ggtttcaaagtacatttaaattctccccctccccagtctttttccccgacaccgtttgca
tcaacagcataccctggaggttgggaagattcccgaaatactcattttcgtcagcctaaa
ccttactatcctgcatcaacgtcatcgtcgccaacaacttcctatacgaatctttcaagg
aatcgcaactcaattccacaagtcccatatgatggaaaaaaatccgatctcaaagtaggc
atcattcttcctaagcaaatctttcaacaaagaagatatcaatccgtgattgctcgtagc
attgaaaatattgccattgagaggagtagttctgcgcaaaatctaagctattttcaactt
gttagtagtagatataactttgattggaaatctggattatttctactcgaagatcaattt
gatgcaattaattttgcacatatggaagtttcaccaccaccagcagatataacaaccata
ctttgtgatcaaatggctagtgggagctcagcaatcatttatttcacaaatacagaaaaa
tttggtcgctctacagcctctactcaatattttctacaaatggctggatttttaggtatt
ccagtaatagcatggaacgctgataattccgggcttgaaacacgctctaacacacggatt
ggttccaaatttactggttacttacagctcgctccaagcgttgcacatcaagtttctgct
ttactttcaatattggatcgttataattggaaccaattcggaatcgtaacaagtgacatt
gctggtcatgatgactttgttcaagctattcgtgatgctcttcatcaaccctcgagaagt
caatatgtgatacaaaatgtcttcaaagtctctgaaagtaacaattggagtgtggaagag
ttaacttcaagtgaggttagaataatacttttatattgtactcaaagtgaggcttccatc
atattcaaaaaagctaacgagacaggccttacttctcacaattacctctggcttgttact
caatctgtaattggggatccaaccgttaggattagtcatcgaaaaaatttaccagtcgga
acattaggaattcattttgaagtagaccaaatgaaaattcttgataagtttatgtctcta
gctcttagagtattttttaccggtgtagagtcaatgatagtcaaacgcaacaagaatttt
attaataaagggcttaaatgtgctgatatcaatgatgcctatcgatggcgtcagggacca
gatttttttagacatttattaaatttaacaatgaacattggccacgagaaactatcatct
tttggcaaacaacgagtattcaacgtagatggctcacttcgtcaaacagaaatgaaaatc
atgaacttcaaacctagaacacagaattctggattagcatgggaagaggtcggaacatgg
aattcatggaatggtttagacatcaaagatatagtatggccaggtggaagtcatctgcct
ccacaaggcgtacctgagaagttttacatgaaaataacattccttgaagagcctcctttt
atcattctaagcgatccagatccgatttcatcaaaatgttctatgaataggggtgttcct
tgttatatgagtgaaaagcacttaagaagtcatgcaaactcatctcaggagtcgacaaag
tgttgttcgggactttgtattgatttattgaggaaatttgaggatgaaatgggtttcaca
tacgatttgattcgagttgaagatccaaagtggggcactattgagcatggaaaatggaat
ggactcatggaaactttagttaataaaaaaacggatttagtattgagttctctaaaaatc
aatgcagaaagagaagccgctgtggatttcacaataccatttttggaatctggaattgcc
attgttgtagccaagagaacagggataatatctccgacagcttttttggaaccatttgat
acctattcatggatgttagtttctatggtagctatacaagcatctgcattttccatattc
ttcttcgaatggctttcaccatcaggatataatatgcaggttgtgccatccaaatcaaat
catagattctcattagttcgaacatattggcttgtttgggcggttttatttcaagcttct
gttcaagttgattgtccaagaggacttactgcaaggtttatgtctagtgtttgggcactt
tttgctgtggtatttttggctttgtatactgccaatttagctgcttttatgattcctcgt
aaagaatatcacgatctttctggacttgacgatagacggataagcaacccattgagccaa
aaacctgctcttaagtttggaacacttccttacagttattcacaagtcacattacaaaaa
cattattcgagtatgtttagctacatgagaccatttaatcgatacaacaatacggaagaa
gctattagagctgtgaaaactggaaaactagatgctttcatctacgatggtacggtgctc
aattatcttgtatctcaggatgaagagtgtagactcttacaagttggatcttggtctggt
atgacaggatatgcactggcctttccacaacattccaaatttaaagcaatgtttaaccaa
aaaatattggaattacgtgaaaatggtgatttagagcggctaagtcgatattggatgagt
ggaagttgtaatccaaatgagcaagaaaaaaaagctagtgaacccttgtcaatatcccaa
tttttatctgcatttttacttcttggaattggaatgtgcctatcagtcatttttctcatt
ttggagcatttgtacatgcggtaccttcaaaaccatttacacaaaacaaaagcatctggt
tgtttctcactaatcagtcttagtattggaaaatctgcagcagctgaaaaaaacaattta
agtgcttcaaaaatagggagcggggagtccagtaacgtattagacgatgaatcaagagaa
ttaaatggtccaacaactataatgacatctttgacacggaattcagagggtgtggaatca
tgtttaagcaagggatgtggtgataattactgtaatatcaaattatttcatttggaaaat
gagctaattatagcgcgagaacgaatagttgaaatggaggaacaacttcaaatttgtgga
gggattttaaaaagtaaaagaaaagaaatggaggaaaaagaaactgtactttga
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