Lepeophtheirus salmonis (salmon louse): 121120175
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Entry
121120175 CDS
T08214
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121120175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsm04040
]
121120175
Ion channels [BR:
lsm04040
]
Ligand-gated channels
Glutamate (ionotropic)
121120175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
121120175
NCBI-ProteinID:
XP_040570955
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Position
6:complement(54801709..54966331)
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AA seq
1209 aa
AA seq
DB search
MMLLQNKGRTKTTKWIRAIISFTLMISSFPYECQGLDLPKPSSNRRGIWKTKSSKRGLQP
LNLGLILPHSIYNEREYTKAVVLTFADLQRSKRGNFKFLQKVSFDPDQVHRIMMKVIPSP
TEILENLCENFLKKKVAAILYLTNSELFGRSTASAQYFLQLASYLGIPVIAWNADNSGLE
RRGQSKMRLQLQLAPSLEHQVAAMLSILVRYNWKQFSVVTSEIAGHDDFIQAVRDKVAEM
REHFSFKIQVEVKVTSREEMAIVKHSETRILLLYSTRAEGENIMRWAKEFDLTGNSYVWI
TTQSVIGEGREALPEFPAGMLGVNFDTSLEHLVKQIPTAMKVFAHGVEAYLSDPQNKVTD
LVPELSCNMTTSASNELESRWSFGERFHRYLRNVTIKNSEFAKPHIDFLPDGTLKSVELK
IMNLRPGVWSNLVWEEIGVWQSYKKESNGLDIKDIVWPGHSHVPPQGVPEKFDLTVGFLE
EPPFINLSPPDPITGRCNVDRGVPCRIPNGSSGNATSGASIMKNDTTSQCCSGLCIDLLA
KFADDLQFEYDLIRVEDPKWGILINGKWNGLMSSLVEKKFDMVLTSLKVNGERESVIDFS
APFLESGTTILVAKRTGIISPTAFLEPFDAASWVLVIFAAVQISALTIFFFEWLSPAGYD
MKTSPAPDHKFSLFRTYWLVWALLFQAPVNMDCPRAFTARFMASVFALFAVVFLAIYTAS
LATFMITREDWDTFSGLDDTRLSNPMSVKPPIKFGTVPHTYTEQALKKHFPEMYEHMKPY
NKPNVIDGVSAVKRGDLDAFVYDGTVLEYLVAQDEDCKLLTVGSWYAMTGYAAAFPRNSK
HFQSFNRKIIEYSENGDLERLRRFWLTGTCNPKKEEKKASEPLAPEQFLSAFLLLLCGIA
LAAGLMGLEHVYINYLRGRVVKTDRAGCCALISQSMGKTLTFRGTVYEASQLMKMHRCKD
PICDSNLMRVRHDLDQSRLKLRRLEKELRQRGIQPLSLLDDGTRYLKKSRNGSIFTEKIP
RWLKSVLPVNTPSDSNKFKVVQNQVLMQKCRSNDELMRSKMNSSTSQGTLSSHKLDVLPE
YNSTTLPSSVIPQCRADHLFSLPQKPKQKTKDKDEVVYLSPPPPIPPHRTTSKLRNADSL
HDVSTTNECNNNNNKKLIQERRYVCEKVASPRNSKNSGGTNQKKPTRCKMKCYVVHYEVQ
MPIVLTLNT
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgatgttacttcaaaataaaggaagaacaaaaacaactaagtggattcgtgctataatt
tcatttacactaatgatctcaagttttccttatgagtgtcagggtttagatttgccaaaa
ccatctagtaatcgacgagggatatggaaaactaagtcttcaaaacggggtctacagccc
cttaatcttgggcttatactcccacactccatctacaatgaacgagagtataccaaggct
gttgtccttacttttgcagatcttcaacgctccaaaagaggaaattttaaatttctacaa
aaagtatcttttgatccagaccaagtccatcgtatcatgatgaaagtgatacccagtcca
acagaaattctagaaaatttatgtgaaaattttcttaagaaaaaagtcgctgcgatactt
tatttgacaaacagtgaattatttggacgctctactgcctctgctcaatattttctacaa
cttgccagctatctgggaattcctgtcatcgcatggaatgctgataattcaggcttggag
agacggggtcaatcaaaaatgcgattacaacttcaattagctccaagtttggaacatcaa
gtagcagccatgctctctatattggtgcgctataactggaaacagttttccgtcgttaca
tctgagattgcaggacatgatgatttcattcaagccgtccgtgataaagttgcagaaatg
agggagcatttcagcttcaaaattcaagtggaagtgaaggtgacgtcacgtgaggaaatg
gcgatagtaaagcactcagagacccgaattctcttactttattccacgcgtgctgagggt
gagaatattatgagatgggcaaaggaatttgatttaactgggaattcctatgtatggatc
acaacacagagtgtcattggtgaagggcgggaggctttaccagagttcccagccgggatg
ttgggcgtcaattttgatacttctttggagcatttagtcaaacaaatcccaacggcaatg
aaggtatttgctcatggagttgaggcctacttatcggatcctcaaaacaaagtaacggat
ttagtaccagagctctcttgtaatatgacaacatctgcatctaatgaattagagtctcga
tggagttttggagagcgatttcatcgatatttacgaaatgttacgattaaaaatagcgaa
tttgcaaaaccacatatagatttcctgcctgacggtactcttaaatctgttgagctcaaa
ataatgaatctaagaccaggagtatggtcaaaccttgtatgggaagagattggtgtatgg
caaagctataaaaaagaaagtaatggtttggatatcaaggatattgtatggccaggtcat
agccacgttcctcctcaaggtgttccagaaaaatttgatctcacagtgggatttctagag
gaacctccattcattaatttatctcctccagatcccataacagggagatgcaatgtagac
agaggtgttccttgtcgtataccaaatggttcgagtggcaacgctacttcaggagcttcc
attatgaaaaatgatacaactagtcagtgttgttctggtctctgtattgatttgttggct
aaatttgcagatgatctgcagtttgaatatgatttgattcgtgtagaagatccaaaatgg
ggtattttaattaatggtaaatggaatggcctaatgtcttcgcttgtggaaaagaaattt
gatatggtacttacatctcttaaagtcaatggggaaagagagtccgttattgacttttca
gctcccttcttagaatctggaacaactattctagtcgctaaaagaactggaataatttct
ccgacagcttttttagagccatttgatgctgcatcttgggttctagtgatatttgctgca
gttcaaatatctgccttaacaatattcttttttgaatggctaagtcctgccggctatgac
atgaaaacaagcccagctccagaccacaagttttcccttttccgaacctactggctggtt
tgggctttactctttcaagcaccagtgaatatggactgtccaagagcgtttactgctcga
tttatggcttcagtttttgctttatttgctgtcgtatttctcgccatatatactgcttcc
ctggcaacttttatgatcacaagggaggattgggatactttttcggggctagatgacaca
cgattgtcaaatcccatgagtgttaagcctccaataaagtttggtactgttccacacact
tacacagagcaagctttgaagaaacattttcctgaaatgtacgagcatatgaaaccttat
aataagcctaatgtgattgacggggtatctgctgttaagagaggagatttggatgcattt
gtatatgacggtacagtgctggaatatctcgtagctcaagacgaagattgtaaactacta
acagttgggtcttggtatgctatgactggatatgcagcagcctttccaagaaactcgaaa
cattttcagtcctttaatcgaaaaatcatcgaatattcagaaaatggtgacttggagcgt
ttaagacgtttttggttgacaggtacatgcaacccaaaaaaggaagaaaaaaaggctagt
gaacctcttgctccagaacaatttctatctgcgttcttgctcttactttgtggaattgca
ctagctgctggtctgatggggcttgagcatgtgtacattaattacctcagaggaagagta
gttaaaacagacagagctggttgctgtgcattaattagccagagcatgggtaagacttta
acgtttcgtggtactgtctacgaggcaagtcaacttatgaaaatgcatcgatgtaaagat
ccaatatgtgatagtaatttgatgagagttcgtcatgatttagatcaatctcgattaaaa
cttcgtcgtctagaaaaagagcttagacagcgagggatacaacccttgtctctcctggat
gatggcacacgataccttaaaaaatcccgaaatggctcaattttcacagaaaagattcca
aggtggctaaaatcagttcttcctgttaatactccttcagattccaataagttcaaagta
gtccagaaccaagtactaatgcaaaaatgccgatccaatgatgaattaatgagatcaaaa
atgaattcatcaacatcccaagggacattgtcttcgcataaactcgatgtactacccgag
tataatagtacaactcttccatcaagtgttatcccacaatgtagagctgatcatttattt
tcattgccacaaaagccaaaacaaaagacaaaggataaagatgaagtagtttatctctcc
cctccacctcccattcctccccataggacaacaagtaaattaaggaacgcggatagtctt
cacgacgtatccaccaccaacgaatgtaacaacaacaacaataaaaaattaatccaagag
cgtagatacgtttgcgaaaaagttgcgtctcctcgaaattcaaagaacagtggtggaact
aaccagaaaaaacctacacggtgcaaaatgaagtgttatgtggtacactatgaagttcaa
atgcccatagtattaactctaaatacataa
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