Lepeophtheirus salmonis (salmon louse): 121123492
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Entry
121123492 CDS
T08214
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03020
RNA polymerase
lsm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121123492
09124 Replication and repair
03420 Nucleotide excision repair
121123492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsm03021
]
121123492
03400 DNA repair and recombination proteins [BR:
lsm03400
]
121123492
Transcription machinery [BR:
lsm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
121123492
DNA repair and recombination proteins [BR:
lsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
121123492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
121123492
NCBI-ProteinID:
XP_040574550
LinkDB
All DBs
Position
8:complement(3139385..3140434)
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AA seq
279 aa
AA seq
DB search
MPYANQPSINITELTEDLVKFTLEDTDLSVANAIRRVMIAETPIMAIDWVQLESNSTVLS
DEFIAHRLGMIPLTSDDAVDSMQYSRDCTCTDFCRECAVEFTLDVKCHEETTRNVTSADL
KSSDPKVIPVTSRNQEEDGHEYGNENDDILIVKLRKGQELKVRAYAKKGFAKEHAKWNPT
AGVSFEYDPDNALRHTLYPKPEEWPKSEYTELEEDQTQAPYDYKAKPNKFFFITEAAGSL
KPENIVLMGVAVLKKKLSDLQTQLSQELQNDALTINYNN
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgcgaatcaaccctcgattaatataacagagctaacggaggatttggtaaaa
ttcacgttggaagatacggatctaagtgtagcaaacgctattcgtcgagtcatgattgcc
gaaacacccatcatggccattgattgggtgcagttagagtccaattcaacggtccttagc
gatgaattcattgctcatcgacttggaatgatacctttaacaagtgatgatgctgtggat
tccatgcagtactctcgtgactgtacatgtacggacttttgtcgtgaatgtgccgttgag
tttactctggatgttaaatgtcatgaagaaacgacacgaaatgtcacttcagcagatttg
aaatcctccgatcccaaagttatacctgtcacatccaggaatcaggaggaggacggacac
gaatacggaaatgaaaacgatgatatcctcatcgtaaagcttcgtaaaggacaagagctc
aaagtaagagcgtatgccaaaaaaggctttgctaaggaacatgcgaaatggaacccaact
gcgggagtctcctttgaatacgatccggataatgctctacgacacacactctaccctaag
ccggaggaatggcccaaatcagagtatactgaattggaagaggatcaaacgcaagcacca
tatgactacaaggccaagccaaacaaattctttttcattaccgaagcagctggatctctc
aaacccgagaatatcgttcttatgggcgtcgccgtccttaaaaagaaattaagtgatctt
caaacccaactcagccaggaacttcaaaacgatgcactaactattaattacaataattaa
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