KEGG   Lepeophtheirus salmonis (salmon louse): 121123540
Entry
121123540         CDS       T08214                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lsm  Lepeophtheirus salmonis (salmon louse)
Pathway
lsm03020  RNA polymerase
lsm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    121123540
  09124 Replication and repair
   03420 Nucleotide excision repair
    121123540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsm03021]
    121123540
   03400 DNA repair and recombination proteins [BR:lsm03400]
    121123540
Transcription machinery [BR:lsm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     121123540
  RNA polymerase III system
   RNA polymerase III
     121123540
  RNA polymerase I system
   RNA polymerase I
     121123540
DNA repair and recombination proteins [BR:lsm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      121123540
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 121123540
NCBI-ProteinID: XP_040574600
LinkDB
Position
8:11483616..11483930
AA seq 104 aa
MCNLDDDADADNIPDNEADPSSGNSKSKQKRTTTLYMTKYERASVLGTRALQTAMCAPVM
VELEGETDLLQIAMKELKQRKISIIIPMYLPDGSYEDWALMNSL
NT seq 315 nt   +upstreamnt  +downstreamnt
atgtgtaatcttgatgatgatgctgatgccgacaatattcctgataatgaggcggatcca
tcatcagggaattctaaaagtaaacagaagcgtacaacaacgctctatatgacaaaatat
gaacgggccagtgtattaggaaccagagcacttcaaacagctatgtgtgctcctgtcatg
gtagagctggaaggagagacggacctccttcaaattgcaatgaaagagcttaagcaaagg
aaaatatccattatcattccgatgtatctccctgacggatcatacgaggattgggcattg
atgaactcattataa

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