Lepeophtheirus salmonis (salmon louse): 121132020
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Entry
121132020 CDS
T08214
Name
(RefSeq) probable glutamine--tRNA ligase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
lsm
Lepeophtheirus salmonis (salmon louse)
Pathway
lsm00970
Aminoacyl-tRNA biosynthesis
lsm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121132020
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lsm01007
]
121132020
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsm03016
]
121132020
Enzymes [BR:
lsm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
121132020
Amino acid related enzymes [BR:
lsm01007
]
Aminoacyl-tRNA synthetase
Class I (A)
121132020
Transfer RNA biogenesis [BR:
lsm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121132020
Prokaryotic type
Other AARSs
121132020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA_synt_1c_R2
tRNA-synt_1c_C2
tRNA-synt_1c_C
ELF
Motif
Other DBs
NCBI-GeneID:
121132020
NCBI-ProteinID:
XP_040583382
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All DBs
Position
1:complement(53857533..53860237)
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AA seq
786 aa
AA seq
DB search
MSGGEDERIALFESLGLSQTKAKETLKNEKLSKSLEALIRSIPSGQRESVSSTVGTLIYH
VASKMKPQVFDKHHKVVLNYILDGKLSSELKLNAALDYILKNAASSQLNIQEFEEAAGVG
VLITPEQIEAEVEKVIKGVKADLLEKRYRYNTGLLMSQVRSKLKWVDGKALKNEIDIQIL
DILGPKTDADLAPPPKAPKAPKKTNDETKDKKPSNKAPLKEQQASEDNNNSITIKELMST
KVKFHKPGENFTSDGYVTTPKTNQILKEHLKRTGGRVKTRFPPEPNGILHIGHAKAININ
FAYADVHNGTCNLRYDDTNPEKEEEKFFVAIKDMVEWLGYKPDKITHSSDNFDQLYEWAK
VLIQKDLAYICHQKVEDIRGFNPPPSPWKNRPIEESLQLFEDMKHGKFEEGEATLRLKLT
LEEGKVDPVAYRIKYAAHHRTGDKWCIYPTYDYTHCLCDSIEDITHSLCTKEFQNRRSSY
YWLCNALDIYCPVQWEYGRLNVSYGVISKRKIAKLIETGVCSDWDDPRLFTLTALRRRGF
PPEAVNNFVARLGVTGAQMTVDPSMLEASVRSYLNVHAPRCMVVLEPLKVKITNGTSLPK
KVNDVPLFPDDPSKGTRSLSLSSEIYIEISDFNEVPEKGYRRLCPGQSVGLRYAGIVLNF
LNKIGPNEIAAEFVHVSEVKSKPKAFIHWVDASASSNITIRLYDRLFKHANPEDPSVVPG
GFLTDVNPDSLRVLEDSVIDSSVLKGMKNYDKFQFERNGFFSVDPDTNSNRCVFNRTVSL
KEDSGK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaggagaggatgaacgcattgctctcttcgagtccttgggtctttcgcaaaca
aaggcaaaagaaacgctcaagaatgaaaaactctccaaaagtcttgaggctcttattcga
tcaattccttcgggacaacgggaatccgtttcatctactgtgggcacactaatttatcac
gtagcttctaaaatgaagccacaagtctttgacaagcatcacaaagtcgtgttaaattat
attctggacggaaaactttcatctgagctgaaactcaacgccgccctcgattacatcctc
aagaacgcggcctcctcacaactaaacatccaggaatttgaagaagcagcaggggttggc
gtactcattacacccgagcagatcgaagctgaagtagaaaaggttattaaaggagtgaag
gcggatcttttggagaaacgctatcgctacaatacggggcttctcatgtcgcaagtgcgt
tccaagctcaaatgggtggatggaaaagccctcaaaaatgaaatagatattcaaatactg
gatatcttaggtcccaaaacggatgcagatcttgctccacctccaaaagctccaaaagcg
cccaaaaaaactaatgatgagacgaaggacaaaaaaccttcgaataaagcccctttaaaa
gagcagcaagcctctgaagataacaataacagtattacgattaaggagcttatgagcacc
aaagttaaatttcataagccgggagaaaactttacctctgatggctacgtcactaccccc
aaaacaaatcaaattctaaaagaacatcttaaaagaactgggggtcgagttaaaacacgt
ttccctcccgaaccaaatggtattcttcacattggacatgccaaagccatcaatattaat
ttcgcctatgcagatgtgcataatggaacttgcaatcttcgctatgatgacacaaatcca
gaaaaggaagaagaaaaattctttgttgccattaaggatatggtcgaatggctgggttac
aaacccgataagataactcactcctctgataactttgatcaactgtacgagtgggctaaa
gtcttgatccaaaaggatttggcatatatatgtcatcaaaaggttgaggacattcgaggc
tttaatcctcctccatctccctggaagaatcgccccatagaagaatctctacaactcttt
gaagatatgaagcatggtaaatttgaggaaggagaggccactcttcgtttaaagttaacc
ttggaagaagggaaagtggatcctgttgcctataggattaaatatgcggcacaccataga
actggagataagtggtgtatttatccaacttatgactatactcactgtctttgtgactcc
attgaagacattactcactctctatgcacaaaagagtttcaaaatagaagatcttcatat
tattggctctgcaatgccctagatatttattgtcctgtgcagtgggagtatgggagactc
aacgtttcctatggtgtcattagtaagcgaaaaattgccaaacttattgaaacaggggtt
tgttcggattgggacgacccaaggttgtttactttaaccgctctacgccgtcgtggtttc
cctccagaggccgtgaataatttcgtcgctcgactgggtgtgactggtgctcaaatgact
gttgatccatccatgttagaagcttctgttcgaagttacttaaatgtccatgcaccaaga
tgtatggttgtacttgaacccttaaaagtcaaaattaccaacggtacctcattgccaaaa
aaagtcaatgatgttccactctttccagacgatccctccaaaggaactagatctttatct
ctaagctctgaaatatacattgaaatatcggactttaatgaagttccagaaaaaggatat
cgacgactctgccctggtcagagtgttggtctacgctatgcaggaatagttttaaacttt
ttgaataaaatcgggcccaatgagattgcagcagagttcgttcatgtatcagaagtaaaa
agtaaacctaaagcgttcatccattgggttgatgcatccgcttcatcaaatattactatt
cgcctctatgatcgcctctttaagcatgctaatccagaagatccatccgttgtacccgga
ggatttctcacggacgttaacccagattcgttgcgagtgcttgaagactctgtcattgat
tctagtgttttgaaggggatgaaaaattatgacaaatttcaattcgaacggaatggattc
ttttctgttgatccagatactaattccaatcgttgtgtgttcaatcgtacagtgtccctt
aaagaggattctggaaaatga
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