Lysinibacillus sphaericus: Bsph_4111
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Entry
Bsph_4111 CDS
T00656
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsp
Lysinibacillus sphaericus
Pathway
lsp03030
DNA replication
lsp03410
Base excision repair
lsp03420
Nucleotide excision repair
lsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bsph_4111
03410 Base excision repair
Bsph_4111
03420 Nucleotide excision repair
Bsph_4111
03440 Homologous recombination
Bsph_4111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsp03032
]
Bsph_4111
03400 DNA repair and recombination proteins [BR:
lsp03400
]
Bsph_4111
Enzymes [BR:
lsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Bsph_4111
DNA replication proteins [BR:
lsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bsph_4111
DNA repair and recombination proteins [BR:
lsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Bsph_4111
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bsph_4111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACA41577
UniProt:
B1HWD8
LinkDB
All DBs
Position
complement(3980472..3983099)
Genome browser
AA seq
875 aa
AA seq
DB search
MTKEKLLLLDGNSLAYRAFFALPLLTNDSGIHTNAVYGFTTMLQRILEEEQPTKILVAFD
AGKTTFRHETFTEYKGGRQKTPPELSEQFPYIRKLIDAYGIKQYEQDLYEADDIIGTLAK
EASSQDMDVIIVSGDRDLTQLATEQVTVYITKKGITEIERNTPAFIAEKYGLTPLQIIDM
KGLMGDSSDNIPGVPGVGEKTAVKLLKEHGSVEALYEAMDTLKASKMKEKLVANEEQAIM
SKKLATIYTDAPITISLTDLAYNGPNEEELMNVWRELGFKSLLEKSDFTVQEQEQTPFDF
EQVQEVRQEDLQDVMAVHVELENEHYHTCALLGMALSDGTKTQYIPFEIAAKSDILRRWL
EDSSKIKYMSDSKASKAALKRAGIQLAGVDFDLVLASYINNPGLSGDDVATLARELGYYD
VQADETVYGKGAKRAVPEIDKLAQHVSRKAYAVWSLQPKLEALLKENEQFDLYKELELPL
AAILGEMESEGITVNRATLEKMGQELNDKLVVLEQEIYAEAGETFNINSPKQLGVILFDK
LGLPVIKKTKTGYSTAADVLEKLKSEHAIIEYILLYRQLGKLQSTYIEGLLKEIHEKDSK
VHTRFQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFVPSKEDWILFSADYSQIELRV
LAHMSEDKNLVEAFREGMDVHTRTAMDVFHVSEEEVDSNMRRAAKAVNFGIVYGISDYGL
SQNLDITRKEAATFIEKYFASFPGVKQYMDDIVQNAKFNGYVTTILNRRRYLPDITSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDARLKKENMQAKLLLQVHDELIFEAPKEEI
AMLEKIVPEVMENAIELSVPLKVDFNHGSTWYEAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaaaaattactattattggacggtaatagtttagcatatcgcgcgtttttt
gcgttgccattgttgacgaatgatagtggtattcatacaaatgctgtatacggctttaca
acaatgctacaaagaatattagaggaagaacaaccaacgaaaattttagtggcttttgat
gcaggaaaaacaactttccgtcatgaaacctttacagaatataaaggtggacgacaaaag
actccaccagaattatcggagcaattcccttatatacgaaagctaattgatgcttatgga
ataaaacaatacgagcaagatttatatgaagcggatgatattatcgggacgctggcgaaa
gaagcttcatcacaggatatggatgtgattatcgtttctggtgaccgtgatttaacacag
cttgcgacggagcaagtaacagtttatataacgaaaaaggggattacagaaattgagaga
aatactccggcctttattgcagaaaagtacggtttaacgccgctacagattattgatatg
aaaggcttaatgggtgattcttcagataatattcctggtgtgccaggtgttggtgaaaag
actgccgtcaaactattaaaagagcatggctccgttgaggcactttatgaggcgatggat
acattgaaagcttctaaaatgaaagaaaagctggtagccaatgaagagcaggctattatg
agtaagaaactggcaacgatttatacagatgcaccaattaccatttcactaactgatctc
gcttacaacggaccaaatgaagaagaattaatgaatgtatggcgtgagctgggctttaaa
tcactgctcgagaaaagtgattttactgtgcaagagcaagagcaaacaccttttgatttt
gaacaagttcaagaagtacgccaagaagacttacaagatgtgatggctgtgcatgtggag
ctagagaatgaacattaccacacttgtgcgctactagggatggcattatctgatggaaca
aagactcaatacattccttttgagattgcggcaaaatcagatatactacgtcgctggtta
gaggattcatcaaaaataaaatatatgtctgattccaaagcgtctaaagcggcattaaaa
cgagcaggtattcaattagctggcgttgattttgatttagtgcttgcttcgtatattaat
aatcccggacttagtggagatgatgttgccactcttgcaagagagcttgggtattatgat
gtacaagcagatgaaacggtctatggaaagggagccaaacgtgctgtacctgaaatagat
aagcttgctcagcatgttagccgaaaagcctatgctgtatggtcattacagccgaagcta
gaggcattattaaaagaaaatgaacaatttgacctttataaagagttggaattgcctctg
gcagccattttaggtgagatggaaagtgaaggcattactgttaaccgtgccacgctagaa
aaaatgggacaagagcttaacgataagcttgtcgtacttgaacaagaaatttatgcggag
gcaggagaaaccttcaatattaattcaccaaaacaattaggtgttattttattcgataaa
ttgggcttacctgttattaaaaaaacgaagacgggctattcgacggctgctgatgtatta
gaaaaattaaaatcagagcatgccattattgaatatattctgttatatcgtcagcttggt
aaattacaatctacttatattgaagggttgctaaaggaaatacatgaaaaggatagcaag
gtgcatactcgtttccaacaagctctaaccgctacaggacgactaagctcgacagatcca
aatttacaaaacatccctatccgtttagaggagggacgtaaaatccgtcaagcatttgtc
ccttcaaaagaggattggatcctgttttctgcggattattcgcaaatcgaattacgtgta
ctcgctcatatgtcggaagataaaaaccttgtagaggccttccgtgaagggatggatgtt
catacacgaacagcgatggatgtattccatgtatccgaagaagaagttgatagtaatatg
cgtcgtgcagcaaaggctgtgaactttgggattgtttatggaatcagtgattatggtcta
tcacaaaatctagatattacccgtaaggaagcggcaacttttattgagaaatatttcgct
agtttcccaggcgtcaaacagtatatggatgatattgtgcaaaatgcgaagttcaatggc
tatgtcacaacgattttaaatagacgtcggtatttaccagatatcacaagctcgaacttt
aatttaagaagttttgctgagcgtacggctatgaataccccgattcagggaagtgctgcg
gatattattaaaaaagcaatgattgatatggatgctcgactaaaaaaggaaaatatgcag
gcaaagctactcttacaagtgcatgatgaattaatctttgaagcacctaaggaagagatt
gcgatgttagaaaaaattgtaccagaggtaatggaaaatgcgattgagctttccgtaccg
ctaaaagtagattttaaccatggttcgacatggtatgaagcaaaataa
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