Lucilia sericata (common green bottle fly): 119613783
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Entry
119613783 CDS
T08270
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lsq
Lucilia sericata (common green bottle fly)
Pathway
lsq03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsq00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119613783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsq03019
]
119613783
Enzymes [BR:
lsq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
119613783
Messenger RNA biogenesis [BR:
lsq03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
119613783
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
nSTAND3
CbiA
AAA_10
AAA_16
TniB
AAA_24
ATP_bind_1
AAA_18
ATPase_2
Motif
Other DBs
NCBI-GeneID:
119613783
NCBI-ProteinID:
XP_037825754
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MTEENKNYKEYTLEADSELRFEIEDKDAKVQVTLISGFAEMFGTELVKKKKYDFAVGAKV
AIFTYHGCVLHLTGKTDVSYISKETPMVQYLNCHSALEQLREQAEEKDERGPVAMVVGPM
DVGKSTLCRILLNYAVRLGRRPLYVDTDVGQGALAIPGTIGAILIERPASIEEGLSQTAP
LIYHFGYKTPSGNSTLYKAVISKMADVTLESLNVNKRTKHSGIIINTCGWVKGDGYANLV
HTAQAFEVNAIFVLDQERLYNELLRDMPSFVKVVLLPKSGGVVERSKELRAECRDQRIKE
YFYGSTTPFYPFSIEVKFADLKLYKIGAPPLPDSCMPIGMKAEDNKTKLVAVTPSHSLLH
HILAVSFVESTEEDVIGTNVAGFVCVTGVDMERQAITVLSPQPRPLPNTLLLLSDLQFMD
SHA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggaaaataaaaactataaagaatacacattggaggctgattccgaattgcgt
tttgaaatcgaagataaagatgctaaagtgcaagtgacgcttatttcaggatttgcggaa
atgttcggcaccgaattggtaaaaaagaaaaaatatgattttgcggtgggagctaaagta
gccatattcacttatcatggctgtgttttacatttaacgggtaaaacggatgttagctat
atttcgaaagagacacccatggtacagtacctgaattgtcactctgccttggagcaattg
cgtgagcaggccgaagaaaaagatgaacgcggtccggtggccatggtagtgggccccatg
gatgtgggcaagagtactttatgtcgcatattattaaattatgctgtgcggctgggtaga
agaccgctttatgtggacacagatgtgggacaaggagctctggctatacccggtaccata
ggtgctatattgatagaaaggcccgctagcatagaagaaggtctatcgcaaacggctcct
ttaatttatcattttggttataagacaccttccggtaatagtacactctataaggcagtt
ataagcaaaatggcagatgttacactggagtcgctaaatgtaaataaaagaaccaaacat
tcgggtattattataaacacctgcggttgggtgaagggagatggttatgctaatttagtg
catacggcacaggctttcgaagtgaatgccatatttgttttggatcaagaacgtctatac
aatgaattgttgcgtgatatgccttcgtttgttaaggtggttttactgcccaaaagtggc
ggtgtggtagagcgtagtaaagaactacgtgccgaatgtagagatcaacgtattaaggag
tatttctacggctcaacaacgcccttctatcctttttcgatagaagttaagtttgcagac
ttaaaactatacaaaataggagcaccacctctaccggattcatgtatgcccataggcatg
aaggctgaagataataaaacaaaactggtagctgttacaccttcacattcacttttacat
catatattagcggttagttttgtcgagagtaccgaagaggatgtaattggtacaaatgtg
gcaggttttgtgtgtgtcaccggagttgatatggaacgacaggcaataactgttttatca
ccgcaaccccgtcctttacctaataccttattattgctttcagatttacaatttatggat
agtcatgcctaa
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