Lonchura striata domestica (Bengalese finch): 110467703
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Entry
110467703 CDS
T05897
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110467703 (SLC6A4)
Transporters [BR:
lsr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110467703 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
110467703
NCBI-ProteinID:
XP_021380636
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Position
19:complement(7405736..7426816)
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AA seq
668 aa
AA seq
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MEKKTTGNEKEPLTSKKDVSDCSKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGFSGVQSSVPCNGEVEDAQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMALFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGYAICIIDLYVASYYNTIMAWAFYYLISSFTGELPWTSCTN
PWNTANCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYSSYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNPPE
LKLFDYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaccacaggcaatgagaaagagcccctgacttccaagaaagatgtctca
gactgtagcaaaggagaagattgtaaagagaacggacttctggtcaggaacccgaaatct
gccctacggctggtggaggatggcaacaaagtccacccgagccagggggataaaggggag
gcagctcagatctccaatggtttttcaggggtccagagctcagtgccctgcaatggagag
gtggaggatgcccagggcacggccccagcagccaccaccaccaccaccaccaccacgtcc
accacctgcggggccgaggctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctctgtcattggatacgcagtggatctggggaatgtg
tggagatttccttatatctgctatcagaatggaggaggagcattcctcattccttacaca
atcatggccctctttggagggattcctctcttctatatggaattagcactaggacagtac
cacaggaatggctgtatttccatttggagaaaaatatgtcctatattcaaaggaattggc
tatgccatctgtatcatagatctttacgtagcctcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacgggggagctgccctggaccagctgcacaaac
ccctggaacacagcaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccatctctcctgcagaagaattttatacccgccaggttctgcaggtgcacaggtcc
aatgggctggatgacctggggggcattagctggcagctgaccctctgcttgctgctaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtggtttgg
gtgactgccacattcccttacatcatcctcttcatcctgctcgtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactgctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttattccagctacaacaaattccacaacaactgctaccaagatgctctg
gtcaccagcaccgtgaactgcttgaccagctttgtgtctgggtttgtcatcttcaccgtg
ctggggtacatggctgagatgaggaatgaagatgtctcagaggttgccaaggacactgga
cccagcctgctcttcatcacctacgctgaggccattgccaacatgccagcttccaccttc
tttgccatcatcttcttcctcatgctgctcacactggggttggacagcacgtttgcagga
ctagagggagtgattactggagtcctggatgaattcccacacgtctggagcaaacgcagg
gaattatttgtccttggtctgaccatcgtttgctttttggggtcgctggcaaccctgaca
tttggaggagcatatgtggtgaagctgtttgaggaatatgccacgggtccagctgtcctg
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aacgatgtgaaagaaatgctgggctctgccccaggctggtactggcgagtttgctgggtt
gcaattagtccccttttccttctgtttgtcacttgcagctttctgtccaaccctcctgag
ctgaagctttttgattatgattatccctactggaccacagttgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcgcttggtcatcaccccaggg
acacttaaggagcgtattctgaaaagcattaccccagaaacagctacagaaattcccttt
ggagacatccgcatgaacgcagtataa
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