Lonchura striata domestica (Bengalese finch): 110473308
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Entry
110473308 CDS
T05897
Symbol
SMYD1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00310
Lysine degradation
lsr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110473308 (SMYD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsr03036
]
110473308 (SMYD1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
110473308 (SMYD1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
110473308 (SMYD1)
Chromosome and associated proteins [BR:
lsr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
110473308 (SMYD1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MYND
SET
TPR_12
Motif
Other DBs
NCBI-GeneID:
110473308
NCBI-ProteinID:
XP_021391413
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All DBs
Position
4:66088505..66113687
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AA seq
491 aa
AA seq
DB search
MTKGGMESVELFTAEGKGRGLKAQKEFLAGDVIFAEPAYAAVVFDSLTHVICHTCFKRQE
RLHRCGQCKFAHYCDRTCQRAAWLNHKNECSAIKRHGKAPTENIRLAARILWKMEREGSG
LSEGCLVPIEELQNHVDSFGEEEKKELRVDVESFLEFWPPQCQQFGMQLISHIFGVISCN
GFTLSDQRGLQAVGVGIFPNLCQANHDCWPNCTVVFNNGNHEAVRSMFHTQMRIELRALN
KISPGDELTVSYVDFLSLSEERRKQLKKQYYFDCTCEHCKKQLKDDLMLAVKAGESKPSA
DTVKEVIQLSKDTLEKINKARMEGHYHEVVKLCRDCLQKQEPVLGDTNIYLLRILSIASE
VLSYLQMFEEAADYAKRMVDGYLKIYHPNNAQLGMAVMRAGVTHWHAGLIEVGHGLICKA
YAILLITHGPSHPITKDLEVMRVQTEMELRMFQQNEFMYYKMREAALKNQKIQVMPEPSN
ETAPSLFHKKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaggaatggagtccgtggaattgttcacagccgaaggcaaaggcaggggt
ttgaaagcccagaaggaattcttggctggggatgtcatctttgcagagccagcctacgca
gccgtggtttttgacagcctgacacacgtcatctgtcacacctgcttcaagcggcaggag
aggctgcaccgctgcgggcagtgcaagtttgcccattactgcgacaggacctgccagaga
gcagcctggctcaaccacaagaacgagtgctctgccatcaagagacatggcaaggcaccc
acagaaaacatcaggctggctgcccgcatcctgtggaagatggagcgggagggcagcggg
ctgtccgagggctgcctggtgcccatcgaggagctgcagaaccacgtggacagctttggg
gaggaggagaagaaggagctgcgtgttgacgtggagagtttcctggagttctggccgccc
cagtgccagcagttcgggatgcagctcatctcccacatattcggggtgatcagctgcaat
ggctttaccctcagtgaccaaagaggactgcaggctgttggtgtgggaatcttccccaac
ctctgccaggccaaccatgactgctggcccaactgcactgtcgtcttcaacaatggcaat
catgaggctgtaagatcaatgttccacacacagatgaggatcgagctgagggccctgaac
aagatttccccgggggatgagctgacggtttcctacgtggatttcctcagcctgagcgag
gagcggcggaagcagctcaagaagcaatattacttcgactgcacgtgcgagcactgcaag
aaacagctcaaggatgacctgatgctggcagtgaaggcaggggaaagcaagccctctgca
gacacagtgaaggaggtgatccagctctccaaggacaccctggagaagatcaacaaggcc
cgcatggagggacattaccatgaggtggtgaagctgtgccgtgactgcctgcagaaacag
gagcctgtgctgggggacacgaacatctacctgctgaggatcctcagcattgcctccgag
gtgctctcctacctccagatgtttgaggaagcagctgactatgccaagaggatggtggat
ggctacctgaaaatttaccatcccaacaacgcgcagctggggatggccgtgatgcgggcg
ggagtgactcactggcacgctggcctcattgaagttggccatggcttgatctgcaaagcc
tatgccattctcctgataacccatggaccttcccacccaattaccaaagacctggaggtc
atgcgtgtccagacggagatggagctgcgcatgttccagcagaatgagttcatgtattac
aagatgagggaagctgccctcaagaaccagaagattcaagtcatgcctgaacccagcaat
gagaccgcaccaagcctcttccacaaaaaggaataa
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