Lonchura striata domestica (Bengalese finch): 110476028
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Entry
110476028 CDS
T05897
Symbol
ESR1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsr03000
]
110476028 (ESR1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsr03310
]
110476028 (ESR1)
Transcription factors [BR:
lsr03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
110476028 (ESR1)
Nuclear receptors [BR:
lsr03310
]
3. Estrogen like
3A. Estrogen receptor
110476028 (ESR1)
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
ESR1_C
Thyroglob_assoc
Motif
Other DBs
NCBI-GeneID:
110476028
NCBI-ProteinID:
XP_021396277
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Position
3:complement(55445727..55602186)
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AA seq
621 aa
AA seq
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MATACWEQCGLPAADLTVDSKSRYVPCSLPLVLTMTLHTKTSGVTLLHQIQGTELETLSR
PQLKIPLERSLSDMYVETNKTGVFNYPEGATYDFGTTAPVYSSTTLSYAPTSESFGSSSL
AGFHSLNSVPPSPVVFLQTAPQLSPFIHHHSQQVPYYLENDQGSFGMREAAPPAFYRPSS
DNRRHSIRERMSSANEKGSLSMESTKETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQ
GHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRVMKQKRQREEQ
DSRNGEASSTELRAPTLWASPLVVKHNKKNSPALSLTAEQMVSALLEAEPPLVYSEYDPN
RPFNEASMMTLLTNLADRELVHMINWAKRVPGFVDLTLHDQVHLLECAWLEILMIGLVWR
SMEHPGKLLFAPNLLLDRNQGKCVEGMVEIFDMLLATAARFRMMNLQGEEFVCLKSIILL
NSGVYTFLSSTLKSLEEKDYIHRVLDKITDTLIHLMAKSGLSLQQQHRRLAQLLLILSHI
RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPAARSAAPMEEENRSQLTTASAS
SHSLQSFYINSKEEENMQNTL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagcctgctgggagcaatgtggactgccagctgccgatctcactgttgacagt
aaaagcagatatgttccttgctcactgccattagtactgaccatgacccttcacaccaaa
acctctggagttaccctgctgcaccagattcaaggcactgaactggagacactgagcaga
cctcagctgaagattcccctggaaagatctctcagcgacatgtacgtggagaccaacaag
acaggagtttttaactacccagaaggagccacctatgactttggtactacggctcccgtc
tacagctctactacgctcagctatgcccctacgtcggaatcttttgggtccagcagtctg
gcaggatttcactccctgaacagtgtcccaccaagcccagtggtgttcttgcaaacagca
ccccagctgtcgcccttcatccatcatcacagtcaacaggtaccctattaccttgaaaat
gatcagggcagctttgggatgagggaagctgctcctccagccttctacaggccgagctcc
gataacaggcgccacagcatccgggagaggatgtccagtgccaatgagaaggggagcctg
tccatggagtccaccaaggaaacccggtactgcgccgtctgcaacgactacgcctcaggc
taccactacggagtctggtcttgcgagggctgcaaagcctttttcaaaaggagtattcaa
gggcacaatgactacatgtgtcctgctactaaccagtgcaccattgacaagaacagaagg
aagagttgccaggcctgccgactgagaaaatgttacgaagtgggaatgatgaaaggtgga
atccgaaaagaccgcagaggtgggcgagtgatgaaacaaaaacgccaaagagaggagcag
gattccaggaatggggaggcttcttcaacagagctgcgagctcccaccctttgggcaagt
ccactggtggttaaacataacaagaagaacagcccagccctgtccctgacagcagaacag
atggtcagtgccttgctggaagctgagccacccctagtttattctgaatatgacccaaac
agaccattcaatgaagcttctatgatgacgctgttgaccaaccttgcagacagagaattg
gtgcacatgatcaactgggcaaagagagttccaggatttgtggatttaacactccatgat
caggtccatctactggaatgtgcctggttagagatactgatgatcggcttagtgtggcgc
tccatggaacacccaggaaagcttttgtttgcacctaacctgttactggacaggaatcaa
gggaaatgtgtagagggcatggtggaaatctttgacatgctgctggctactgctgctcgg
tttcgcatgatgaaccttcaaggggaggaatttgtgtgccttaaatccatcatcctgctc
aattctggtgtgtacacttttctttccagcaccttgaaatctctggaagagaaagactat
attcaccgtgtcctggacaaaatcacagatactctgatacacttaatggctaagtcaggt
ctttctctgcagcagcaacacagacgactggctcagctcctcctcatcctctctcatatc
agacacatgagcaacaaaggaatggagcacctgtacaatatgaagtgtaagaatgtagtt
ccgctctacgatctcttgctggagatgctggatgctcaccgactgcatgccccagcagcc
aggagtgctgcacccatggaagaggagaaccgaagccagctgacaactgcatcagcttca
tctcattccttgcagtctttttatataaacagcaaagaagaggagaatatgcagaataca
ttataa
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