Lonchura striata domestica (Bengalese finch): 110478139
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Entry
110478139 CDS
T05897
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsr02000
]
110478139
Transporters [BR:
lsr02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
110478139
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
110478139
NCBI-ProteinID:
XP_021400265
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Position
15:9905552..9912761
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AA seq
576 aa
AA seq
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MAEQPCLGPPASPAPPNPHTHPRDKWSKKVDFLLSVIGFAVDLGNVWRFPYICYQNGGGA
FLIPYTLMAVFGGVPLFYMELALGQFHRTGAIPIWKRICPIFKGIGFAICIIGLYVSFYY
NTIIAWALFYFCSSFSGTLPWASCDNPWNTPDCTNYFGKSNVTWTNFSRSPAEEFYTRKV
LEIQKSGGLDDIGGIRWQLLLCLFLIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILL
IRGATLPGAWRGVVFYLRPDWGKLLSTTVWVDAAAQIFFSLGPGFGVLLALASYNHFHNN
CYRDALVTSAVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVARDKGPSLLFITYPEAIAN
MVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAVMDEYPQVLAGRRELFVLGLITVCFLG
SLSTLTYGGAYVVKLLEEFGAGCSILAVVLLETIAVSWFYGIQRFSHDVKAMLGFTPGLF
WKLCWVAISPALLALIVISSLLDQPPLTLFEYQYPEWSTSVGFLIGASSFICIPLYMVYK
LVWTPGSLKQRLAVCIRPEKLMRAPQAEGVGMAPVL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagccctgcctgggtccccctgccagccctgcacccccaaacccccacacc
caccccagggacaagtggagcaaaaaggtggatttcctcctctctgtcatcggattcgcc
gtcgatctgggcaatgtctggaggttcccttacatctgctaccagaatggagggggagcc
ttcctcatcccctacacgctgatggctgttttcgggggggtgcctctgttctacatggag
ctggccctggggcagttccacaggacaggtgccatccccatctggaagcgcatctgcccc
atctttaaaggcatcggctttgccatctgcatcatcggcctctacgtctccttctactac
aacaccatcattgcctgggctctcttctacttctgctcgtccttctcgggcaccctgccc
tgggcgagctgtgacaacccctggaacacccctgactgcaccaactactttgggaagagc
aacgtgacctggaccaacttctccaggtcccccgccgaggagttttacacgaggaaggtc
ctggagattcagaaatccgggggtctggatgacatcggggggatccgctggcagctgctc
ctctgcctcttcctcatcttcaccatcgtctacttcagcctgtggaaaggagtgaaaacc
tccgggaaggtggtgtgggtgacagccacgctgccctatgtcgtcctgctcatcctgctc
atccgaggggccaccctgcctggagcctggagaggggttgtcttctacctgcgcccggac
tggggcaagctcctgagcaccacggtttgggtggatgctgctgcacagattttcttctcc
ttgggccctggatttggagtcctccttgctctggccagttacaaccatttccacaacaac
tgctaccgggatgctctggtcaccagtgctgtgaactgcctcaccagcttcctctcaggc
tttgtcatcttcaccgtgctgggctacatggccgagatgagggacgtggaggtggaggac
gttgccagagataaagggcccagcctcctcttcatcacctaccctgaagcaattgccaac
atggtgggatccaccttcttcgccatcattttcttcctgatgatgatcaccctggggctg
gacagcacgtttggaggcttggaggccgtgatcacggccgtgatggacgagtacccccag
gtcctggcagggcgacgggagctcttcgtgctcggcctcatcacagtctgtttcctgggc
tccctcagcaccctcacctacgggggagcctacgtggtgaagctgctggaggagttcggt
gctggctgctccatcctggccgtggtgctgctggaaaccatcgctgtctcctggttctat
gggatccagaggttctcccacgatgtcaaagccatgctgggcttcaccccggggctcttc
tggaagctgtgctgggttgccatcagcccagccttgctggcgttgatagtcatcagctcc
ctcctggaccagccacccctgaccctctttgagtaccagtaccccgagtggagcacctca
gtgggattcctcatcggagcatcgtccttcatctgcatccccctctacatggtgtacaag
ctcgtctggacaccggggtccctcaagcagcgcctcgccgtctgcattcggcccgagaag
ctcatgcgagccccccaggcagagggggtgggcatggcccccgtcctgtag
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