KEGG   Lonchura striata domestica (Bengalese finch): 110478152
Entry
110478152         CDS       T05897                                 
Symbol
POLR2H
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03020  RNA polymerase
lsr03420  Nucleotide excision repair
lsr04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110478152 (POLR2H)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110478152 (POLR2H)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110478152 (POLR2H)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsr03021]
    110478152 (POLR2H)
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110478152 (POLR2H)
Transcription machinery [BR:lsr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110478152 (POLR2H)
  RNA polymerase III system
   RNA polymerase III
     110478152 (POLR2H)
  RNA polymerase I system
   RNA polymerase I
     110478152 (POLR2H)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110478152 (POLR2H)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 110478152
NCBI-ProteinID: XP_021400285
LinkDB
Position
9:8785803..8788200
AA seq 150 aa
MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
NT seq 453 nt   +upstreamnt  +downstreamnt
atggccgggatcctcttcgaggacatcttcgacgtgaaggacatcgacccggagggcaag
aagttcgaccgcgtgtcgcgcctgcactgcgagagcgagtccttcaagatggatctgatc
ctggacgtgaacatccagatctatcccgtggatctcggggacaaattccgcctggtcatc
gccagcaccttgtatgaggacggcaccctggacgatggcgagtacaaccccacggatgat
cggccctccagggcagaccagtttgagtacgtgatgtacggcaaggtgtaccggatcgag
ggggacgagacctccacggaggcggccacgcgcctctctgcctacgtgtcctacgggggg
ctgctcatgcggctgcagggagacgcaaacaacctgcacgggtttgaggtggactcgcgc
gtttacctgctgatgaagaagttggccttctag

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