KEGG   Lonchura striata domestica (Bengalese finch): 110481237
Entry
110481237         CDS       T05897                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lsr  Lonchura striata domestica (Bengalese finch)
Pathway
lsr03020  RNA polymerase
lsr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110481237 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110481237 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsr03021]
    110481237 (POLR2I)
   03400 DNA repair and recombination proteins [BR:lsr03400]
    110481237 (POLR2I)
Transcription machinery [BR:lsr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110481237 (POLR2I)
DNA repair and recombination proteins [BR:lsr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110481237 (POLR2I)
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Ogr_Delta
Other DBs
NCBI-GeneID: 110481237
NCBI-ProteinID: XP_031363503
LinkDB
Position
Unknown
AA seq 111 aa
MEGDGAYEPGFVGIRFCQECNNMLYPKEDKENRILLYALTPIITWWSFGELTQIIADVSQ
DPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE
NT seq 336 nt   +upstreamnt  +downstreamnt
atggagggggacggcgcgtacgagccgggattcgtggggatccgcttctgccaggaatgt
aacaacatgctgtaccccaaggaggacaaggagaaccggattctgctctacgccctgact
ccgatcatcacctggtggagttttggcgagctgactcagatcatcgccgacgtctcgcag
gacccgaccctgccccgcaccgaggatcacccctgccagaagtgcgggcacaaggaggcc
gtgttcttccagtcgcacagcgcccgcgccgaggacgcgatgaggctttactacgtctgc
accgccccccactgcggccaccgctggaccgagtga

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