Lonchura striata domestica (Bengalese finch): 110482440
Help
Entry
110482440 CDS
T05897
Symbol
TRDMT1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsr03016
]
110482440 (TRDMT1)
Enzymes [BR:
lsr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
110482440 (TRDMT1)
Transfer RNA biogenesis [BR:
lsr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110482440 (TRDMT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
110482440
NCBI-ProteinID:
XP_021407361
LinkDB
All DBs
Position
2:20886436..20915671
Genome browser
AA seq
407 aa
AA seq
DB search
MAALRVLELYSGIGGMHQALRESCTHAEVVAAVDVNTLANDVYKHNFPSTPLWAKTIEGI
TLKEFDRLSFDMILMSPPCQPFTRTGLQGDVSDPRTKSFLYILDILPRLQKLPKYLLLEN
VKGFESSSARNELLQTLATCGFKYQEFLLSPTCLGIPNSRLRYFLIAKLQQEPFSFQAPG
QILTRFPDRDPEGVLKEKVTDKVGETSSSLSSEEKNLDPNIGPDSSSKSLPKGPFLFKLE
TVEEMERKHNQDNDSSIQMLKDFLEEENEEMSQYFLPPKSLLRYALLLDIVKPTCRRSTC
FTKGYGHYVEGTGSVLQTAVDVQLESVFKHIDELPEEEQLIKLSTLRLRYFTPREIANLH
GFPLEFGMCCKIHTSTLFFRNAKIYIFFLLGLIQSLFCIFFQTTQFL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcgggtgctggagctgtacagcggcatcggcgggatgcaccaggccctc
agagaaagctgcacacatgcagaagttgtagctgctgttgatgtgaacactcttgccaat
gatgtttataagcacaactttcccagcacaccgttatgggcaaaaactattgagggcata
acactgaaagaatttgacagattatcttttgatatgattttgatgagtcctccctgtcag
ccttttacaagaactggcctgcaaggtgacgtgtccgatccacggaccaagagctttctc
tatatccttgatattctcccaaggcttcagaagcttccaaaatacctacttttagaaaac
gttaaagggtttgaatcctcttctgcgagaaatgaacttttgcaaacactagcaacatgt
ggatttaaatatcaggaatttctcttgtctccaacctgtcttggcattcccaattccagg
ctgcggtattttctaattgcaaaacttcaacaagaaccattttcctttcaagctcctggt
caaatattgacaagattcccagatcgggatccagaaggtgtactcaaggaaaaagtcact
gacaaagtgggtgaaaccagttcttctttgtcctctgaggagaagaatctggatccaaac
attggtccagattccagcagcaagagtctaccaaaagggccttttctgtttaagcttgaa
acagtagaagaaatggaaaggaaacataatcaggataatgattcctctattcaaatgcta
aaagacttcttggaagaggaaaatgaagaaatgagtcaatatttcttaccaccaaagtcc
ttactgcgctatgctctcttgttagacattgttaaacccacctgccggagatccacgtgc
tttacaaaagggtatggacactatgtagaagggactggctcagttctgcaaacagcagta
gatgtacagcttgaatcagtgtttaaacacattgacgaattaccagaagaagagcagctt
ataaaattatcaacactaagactgaggtacttcaccccaagagaaatagcaaatcttcat
ggattccctttggaatttggtatgtgctgcaaaatacacacttctacattattcttcaga
aatgccaagatatatattttttttttactgggactaatccaatctttattttgcattttt
tttcagaccactcagttcttatga
DBGET
integrated database retrieval system
