Lonchura striata domestica (Bengalese finch): 110483513
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Entry
110483513 CDS
T05897
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
lsr
Lonchura striata domestica (Bengalese finch)
Pathway
lsr00531
Glycosaminoglycan degradation
lsr01100
Metabolic pathways
lsr04142
Lysosome
Module
lsr_M00076
Dermatan sulfate degradation
lsr_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
lsr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
110483513
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110483513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
lsr02042
]
110483513
00536 Glycosaminoglycan binding proteins [BR:
lsr00536
]
110483513
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lsr00537
]
110483513
Enzymes [BR:
lsr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
110483513
Bacterial toxins [BR:
lsr02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
110483513
Glycosaminoglycan binding proteins [BR:
lsr00536
]
Heparan sulfate / Heparin
Enzymes
110483513
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lsr00537
]
Enzymes
110483513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
110483513
NCBI-ProteinID:
XP_031359566
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All DBs
Position
1A:42704203..42709527
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AA seq
586 aa
AA seq
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METVRLQSFGICVTCTYPVTSGVVFATLLVSCCSSLNIRARPLLSNSPFLSIWNAPTELC
TERTGVQLDMNFFPLIGSTLKTSVGQNITLFYPDRIGYYPYKNEVTGEAFNGGLPQLSLL
ENHLKKAREDIQFYIPSDEQLGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLSI
SEAESRTIAKMEFEFAAKSFMLETLKLGIEMKPNRLWGYYLYPDCYNYDYKQNPHNYTGA
CLDIEIERNNELNWLWEKSTALYPSIYLETVLKSSRNAQLFVRNRVQEAIRTSYVSNSSH
PLPVFVYTRPVFTDVYEEYLSEDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLDN
YLRRTLTPYLINVTMAARICSQVLCQDSGACARKKWNSSDYLHLNPENIAIQMTKDGKYT
LQGQPSYQDLQTFIEKFDCHCYAGHSCEPRADINDIHYLHACISEDICIQISSNSLSNIE
ASEEKILSNRTAFSFTSESKATLSTHPEVEDFQSTSGNNILNITTAEYNTATAASSYDLE
ENDTRTFSSSSSYKIRMFNLFHLILLLRALIQMIHESENILFPDYI
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgtaagactgcaaagttttggcatctgtgttacctgtacttatcctgtaaca
tctggtgtggtgtttgccactcttctagtttcttgctgctcatctctgaacataagagct
cgtccacttctttctaattcacctttcctttctatctggaatgctcctacagaactttgt
actgaaaggactggagtgcagctggacatgaatttttttcctctaattggaagcacacta
aagacatctgtggggcaaaacatcactctcttctatccagacaggattggctactatcct
tacaaaaatgaagtcacaggagaggcattcaatggaggactccctcaactctcactgctg
gagaatcatttaaaaaaagccagagaggacatccagttctacattccttcagatgaacag
cttggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactgggga
tcaaaagatatttatagacaagaatccattgagctagttcagcagagagacctcagtata
tccgaagctgaatccagaactatagctaaaatggaatttgaatttgcagcaaaatcattt
atgttggaaactttgaagctgggcatagaaatgaaaccaaatcgcctgtggggatattac
ctttatccagactgttataactatgattacaaacaaaacccacacaattatacaggagca
tgtttagatattgaaatagaaagaaataatgagcttaactggttgtgggagaaaagcaca
gcactttatccatctatttatctagagacagtcttaaaatcttccagaaatgctcaactc
tttgttcgcaacagagttcaagaagccattagaacttcctatgtctctaactctagtcat
ccccttccagtttttgtatatacacggccagtattcacagatgtctatgaggaatatctc
tctgaggatgacctggtaaataccattggagaatctgctgctctgggtgcttctggaatt
gtgatctggggtgatatgaatttaacacaaaataagaacacctgtagaactctggacaac
taccttaggaggactttgaccccatacctcatcaacgtcacaatggcagccagaatatgt
agccaagttttatgccaagactctggtgcttgtgcacgaaaaaaatggaattccagtgac
tatcttcacttgaaccctgaaaatattgcaattcaaatgacaaaggatggaaaatacact
ttacaagggcagccatcatatcaggatctgcaaacattcatagaaaaatttgattgtcat
tgttatgcagggcacagctgtgaacctagagctgatataaatgacatccattacctccat
gcttgcatttcagaagatatttgcattcagatatcctcaaattcactttctaacatagaa
gcctctgaagaaaagatcctgtctaacagaacagcattttcatttacctctgagagtaag
gcgacattatctacacatcctgaagtagaagatttccaatctacctctggaaataatata
cttaatataacaactgcagaatataacactgctacagctgccagtagctatgatttagaa
gaaaatgatactcgtactttcagtagttcttcatcctataagataaggatgtttaatctg
tttcacttaattctccttttgagagccttaatacaaatgatccatgaaagtgagaatatc
ctttttcctgactatatttga
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