Lactuca sativa (garden lettuce): 111880634
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Entry
111880634 CDS
T05352
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111880634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111880634
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111880634
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111880634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111880634
NCBI-ProteinID:
XP_023732824
LinkDB
All DBs
Position
7:43278335..43285054
Genome browser
AA seq
1189 aa
AA seq
DB search
MKSEAVARVSGRHRMTPHLPNNPDYEPLRELFSHHIHSFDHFIEYGLEKALMNIKPIEVV
DSNTQLKLRIWFEKPELYPPQKERLSRTVRESLYPFECRQAKISYTGKFLVDVCFKYGDG
PGGAVIREKFNFGQLPVMLKSKLCHLKGADPQKLVSCNEEPSEMGGYFVLNGLERVVRLL
VVPKRNYPTSMVRSAFKNRREGFTDKAVVIRCVREDQSAVTLNLYYISNGSARVGFRIRG
RENLLPIGLVLKALIDTTDHEIFMSLTSVYNEKYEKAMGCVGTQILSERAKIILNEVRDL
NLFTRIQCLQYIGEYFKPFMDGMENESHSAVADAVLREFILVHLDNNHDKFNLLIFMVQK
LFSFIDQTSIPDNPDSLQTQEVLLPGHLVTIYVKEKLQEWLLKAKKLLQDEADNRKKNFE
FGSLADVKKALDKNPAKQVGSAVENMLKTGRLVTQSTLDLKEKAGMTVQAERLNFLRFLS
HFRAVHRGSSLAGLRTTSVRKLLPESWGFVCPVHTPDGSPCGLLNHLTASCRITSYYDSE
GIIRDFSKINKSILSVLVGAGMTPAIPKLVKAGPPEILHVLLDGRVVGAIPTDIVEKAVN
HLRKLKLLAASAIPEDLEVGYVPISMGGAFPGLYLFTSPSRFIRPVKQKFPEEKNNNIEL
IGPFEQVYMEIECPDGGNGGRLKEFPATHEEIHPTGILSVVGNLTPWSDHNQSPRNMYQC
QMAKQTMGFSSQGINCRADQKLYHLQTPQAPIVRTATYEKYRIDDSPLGTNAIVAVLAYS
GYDMEDAMVLNKSSVDRGFAHGHIYQTESIDLADEKNKSNRANRVFRRSNLDKKSHSFID
SDGLPYVGQKIKPGEPYYSMYNEVTSTSFNQKLKGSEPVTVDYVAIDVKNKKQLQKANIR
LRRGRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAML
LESIAAKGGSLHGKFVDATPFSSSVKKPDGTLENEEDSLVNELGSMLTSRGFNFYGTEVL
YSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKKGGGIRFGE
MERDSLLAHGAAYLLHDRLHTSSDHHIADVCSICGSILTTSLIQHQKKAMREIAGLPPGR
VPKKVICVNCGTSKGMETVAMPYVFRYLAAELAAMNIRMTLQLSNGAGA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgaagcagtagcaagggtctcagggaggcatagaatgacgccgcacctaccc
aacaatcccgactatgaaccgttaagggagcttttcagccaccatattcattcattcgac
cacttcatcgaatatggtctagagaaggcactcatgaacatcaaacccatcgaagtcgtg
gattctaacacccagttgaagctaagaatctggtttgaaaaacctgagctatatcctccc
caaaaggagcgcctttctcggacagttcgtgaatctctctatccttttgagtgtagacag
gccaagatttcctatactggtaaatttttggtagatgtttgcttcaaatatggtgatgga
cctggtggagctgttataagagaaaaatttaattttggacagttacctgttatgctaaag
tcaaaactttgtcaccttaaaggtgctgaccctcaaaaactggtgtcttgtaatgaagaa
ccatcagaaatgggagggtactttgtattaaatggacttgaaagagttgtcaggctatta
gtcgtgccaaaaagaaactatccaactagtatggtcagaagtgcatttaaaaaccgaaga
gaagggttcactgataaagctgtggtgataagatgtgttagagaagaccaatcagctgtg
actctcaacttatattatattagcaatgggagtgcaagggttgggtttaggatacgaggg
agggaaaacttgttacccataggtcttgttttgaaggcacttattgatactactgatcat
gaaatttttatgagtttgacatctgtctacaatgaaaaatatgagaaggcaatgggttgt
gttggtactcagattttgagtgaaagggcaaagattattcttaatgaagttagagacttg
aatttatttactcgcatacaatgcttgcaatatattggagagtatttcaaaccttttatg
gatggtatggaaaacgaaagtcactctgctgttgctgatgctgttctaagagaattcata
ttggttcatcttgataacaatcatgataaatttaatctgctaatcttcatggtgcagaaa
cttttctcttttattgatcagacctctataccagacaaccctgattcattgcaaactcag
gaagttcttctgccaggtcacttggttacaatatatgttaaggaaaagctccaggaatgg
ctgctaaaagctaaaaaactacttcaagatgaagctgataacagaaagaaaaactttgag
tttggaagcttagctgatgttaagaaggcattggataagaatcctgcaaaacaagtcggt
tcagctgttgaaaatatgttgaagactggaagattggttacacagtcaactcttgatctg
aaagagaaagctggtatgacagttcaagcagaaaggctgaatttcctccgttttttgtca
cattttagagctgttcatagaggctcatcacttgcaggacttcgtactacaagtgtgcgt
aaattgttgccagagtcatggggttttgtatgccctgttcacacgccagatggctctcca
tgtggactgctgaatcatttgactgcctcatgtcgtatcacctcgtattatgattcagaa
ggaataatcagagatttctcaaaaataaacaaatctatcctaagtgttctggttggagcg
ggtatgacccctgcaattcccaaacttgtcaaagctggtcctcctgaaattcttcatgtt
ctacttgatgggcgtgttgttggtgctattcccactgatatagttgaaaaagctgtcaac
catttacgaaaattaaaactattagcagcttcagcgatccctgaagatctggaggtgggg
tatgtacctattagcatggggggcgcgttccctggtctttatctgtttacaagtccttca
agatttatacgccctgttaaacagaagtttccagaggaaaaaaacaataatattgaactg
attggtccctttgaacaggtgtatatggagatagagtgtccagatggaggaaatggtgga
agattaaaggagtttcctgctactcatgaagaaattcatccaactggaatacttagtgtt
gttggcaatcttaccccttggtctgatcataatcagagtccaagaaatatgtaccagtgt
cagatggcaaaacaaacaatggggttctcttcacaaggaatcaattgtcgtgcagatcaa
aaactttatcaccttcagactcctcaagctccgatagttcgcactgctacatatgaaaag
tataggattgatgactctccattaggaacaaatgcaattgtggctgtgttggcttattca
ggatatgatatggaagatgctatggttttaaataaatcatctgttgatcgtgggtttgct
catggacacatttatcagactgaatctattgatttggctgatgagaagaacaaatccaat
cgtgccaatagagtattcagaagaagcaatttagataaaaaatcacattcattcatcgat
tcagatggactcccatacgttggccagaaaataaaaccaggtgaaccatattacagcatg
tacaatgaagtcacaagcacttcattcaaccaaaaattaaaaggctcggaacccgtaaca
gtcgattacgttgcaatcgatgtcaaaaacaaaaaacaattacaaaaggcaaacatacga
ttaagacgtggcagaaaccctgtaattggtgataaattcagcagtagacacggtcaaaaa
ggtgtatgctcacaattatggcccgatatcgatatgccattttcaggagttacaggaatg
cgacctgatttaatcataaatcctcacgcgtttccttctagaatgacaattgcaatgctt
ctagaatccatagctgcaaaaggaggctctttacatggaaaatttgtagatgcaacacca
ttttccagctcagttaaaaaaccagatggaaccctagaaaatgaagaagactctctcgtt
aatgaactcgggtcaatgttgacttcccgtggctttaatttttacggtacggaagttttg
tatagtggagtttacgggacggaattgacttgcgagattttcatcggtccggtttattac
caacggctccggcatatggtttccgacaagtttcaggttaggtcaacgggaacggttgac
caggttacgaggcaaccgataaaggggaggaagaaaggaggtgggattcggtttggtgaa
atggagagggattctcttcttgctcatggagcggcttatttgttacatgataggcttcac
acgagttctgatcatcatattgctgatgtgtgttcgatttgtgggagtattctgacaaca
tcgctgattcagcatcagaaaaaggcgatgagggagattgctgggctgccacctggcagg
gtaccgaagaaagttatatgtgttaattgtgggacaagtaaagggatggagacggttgct
atgccgtatgtgtttaggtatttggctgcggaattggcggctatgaatatacgtatgaca
ttgcaactaagtaatggagcgggggcgtga
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integrated database retrieval system
