Lactuca sativa (garden lettuce): 111882585
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Entry
111882585 CDS
T05352
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111882585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111882585
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111882585
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111882585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111882585
NCBI-ProteinID:
XP_023734719
LinkDB
All DBs
Position
9:complement(23425701..23432958)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAHAMNSNRGQDTTLTFTKQPYVEDKGPRRIKSIKFSMFSDADVLKMGEVQVSCSRCYVS
QEDKSPVPNGLLDAHMGPPNKSGTCDTCHGKFENCPGHFGYLTLVLPVYNVGYISHIVDI
LKCICKSCSRILLVEEERVGYLKKMRNPKLDHLRKNETFKKVVKRCTAMASSKKAVICSR
CGYINGIVKKAVGTVGVVHDRSKVQDSTSKELTVATSHLKESKTPVNLSPYLNPDKVLKL
FKKMVDEDCDLLYLADRPEKLIISVIPVPPLPIRPSVKVDGGATSNENDVTLRLAEIIKA
NALLNQNLSDPSAANKTMENWEYLQITVALYINSDVRVPPSPNMQNTKPMSGLVQRMKGK
QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVGIPILMAKILTFPERVSNHNIERLRHAV
RNGTIKYPGAKHIRKTDGSMLSLSINARKRLADELKIGDVVDRHLIHGDVVLFNRQPSLH
RMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNL
CTPKNGEILVASTQDFLTSSFLITRKDTFYDRASFALMCCYMGDAMDPLDLPTPVILKPI
ELWTGKQLFSVLLRPYADMRVYLNLTVTEKSYTKPSGKRVKPYETMCPNDGYIYIHNSEL
LSGQLGKATLGNGNKDGLYSVLLRDYNSHAAAACMNRLAKLSARWIGNHGFSIGIDDVQP
GDNLNDNTNRIISEGNKKCDNFILDFNNGKLKLQPGCNAAQTLEAEITGVLNKIRDETGK
VCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFIDRSLPHFQRMS
KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVY
YDNTVRDASACIVQFTYGGDGRDPSQMEGKSGFPLNFSRLLDKAKNTCPSGEHKGMSPTE
IREVVEERLSMHDMTPEGGCSEDFRKKLKQFLENIATTLDFTMKAIMPRGQLNDDESLVF
ENVAQSVSGITPQQLQVFMETCISRYHLKKIDAGTNIGAIGAQSIGEPGTQMTLKTFHFA
GVASMNVTLGVPRIKEILNAAKKISTPVITAKLRTNDNVSFAKLVKGKMERTLLGQVAKS
IKLVLGLRSASIVVSLDKKTIEALQLNINAYTVQDSILKTPKIKLKENHIRILDDYKLEI
NPPYDRNKYYFDLHWYRNRLPSVVVKGIGTIERAVINKKKEQEKFNLLVEGTGLQAVMGM
EGINGHETTSNHILEVQNTLGIEAARRSIIKEIQYTMESHGMSIDIRHMMLLADVMTYKG
EVLGITRFGIQKMKESVLMLASFEKTSDHLFNAAVNGRVDKIEGVSECIIMGIPMLTGTG
MIKVKQRVPQVELYKGTELILA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatgcgatgaatagcaatagaggacaagacaccaccctcacattcacgaaacaa
ccttatgtcgaagataaaggcccccgaaggatcaagagcattaagttctcaatgttttct
gacgctgatgttctcaaaatgggggaagttcaggtttcttgctcccgatgttatgttagt
caagaggacaaaagccctgttcccaatggcttgttggatgcacacatgggtcctccaaac
aagtcaggcacatgtgacacatgccatggaaaatttgaaaattgccctggtcactttggt
tacctgacacttgtgttgccagtttataatgttggatatatttctcatattgtggacatt
ttgaaatgcatatgcaagtcatgttcacgcatattgttggtggaggaagaacgtgtaggc
tatttaaagaagatgagaaatccaaaactggatcatttaagaaagaatgaaacttttaaa
aaggtagtgaaaaggtgcactgctatggcaagtagtaagaaggcagtgatatgctccaga
tgtggctacataaatggtatagtgaaaaaggctgttggaacagttggagttgtacatgat
cgtagcaaagttcaagattctacctcaaaggaattaactgttgctacttctcacctcaag
gagtcaaagacacctgtcaatttgtcaccttatttaaaccctgacaaagttcttaaactt
tttaagaagatggtggatgaggattgtgatttgctttatcttgctgatagacctgagaaa
cttattatatcagtaattcctgttcctccattacctattcgcccttctgtcaaagttgat
ggtggagcaacaagcaatgagaatgatgtaaccttgagattggctgaaattataaaagcc
aatgctcttcttaatcaaaatttatcagacccaagtgctgctaacaaaaccatggaaaat
tgggagtatttacaaattactgttgcactatatataaacagtgatgttcgtgtgcctcca
tcacctaatatgcaaaacactaaaccaatgtctggtcttgttcaacgtatgaaagggaaa
caggggagatttagagggaatttatcagggaaacgtgttgagtatactggaagaacagtt
atttctccagatcctaatttaaagattacagaggttggaattcctatcttaatggctaag
attttaactttccctgagagagtttcaaatcacaatatagagagattaagacatgctgta
cgtaatggaactattaaataccctggtgctaagcatataagaaagacagatggtagtatg
ctatcattgagtatcaatgcaagaaagcgtttggctgatgaattgaaaattggtgatgta
gttgacagacatttgatacatggagatgttgttctttttaataggcaaccgagtttgcat
cgtatgtcaatcatgagtcacagggcgaggattatgccatggagaacattgagattcaat
gaatctgtttgcaatccttacaatgctgattttgatggtgatgagatgaatatgcatgtt
ccacaaacagaagaggctcgaacagaagctcttatgctcatgggggttcagaacaattta
tgtacaccaaagaatggggagattttggttgcatcaactcaagattttttgacatcttct
ttccttataacaagaaaagacactttctatgatcgagcttcatttgcacttatgtgttgt
tatatgggtgatgcaatggatcctcttgatttgccaactcctgttatactcaagccaata
gagctttggactggtaaacagctgtttagtgtattgttgcgcccatatgcagatatgaga
gtttatctgaatcttactgttactgaaaagagttacacaaagccaagtggaaaaagagtc
aaaccttatgaaactatgtgccctaatgatggatatatctacattcataatagtgagctt
ctaagtgggcagcttgggaaggctactttagggaatggcaacaaggatggactttactcg
gttcttcttagggattacaactcacatgctgctgctgcttgtatgaatcgtttagcaaaa
ctaagtgctcgatggataggaaaccatggattctcaataggaattgatgatgtgcaacct
ggggataatttgaatgacaacacaaatagaatcatatctgaagggaataaaaaatgtgat
aattttatattggattttaataatggaaagctcaagttacaacctggttgtaatgctgct
cagacccttgaagctgagatcactggtgtactaaataagatcagagatgaaactggaaag
gtttgtatggaaaaactacattggagaaacagccctttaattatgtctcaatgtgggtcc
aaaggttctccaatcaacataagtcaaatgattgcatgtgttggtcaacaatcagttgga
ggtcaacgagctccaaatggattcatagacagaagtcttccccattttcaaagaatgtca
aaaacccctgctgcaaaagggtttgtagcaaattctttctacagtggtttaacagctact
gagtttttcttccacaccatgggagggcgagaaggtcttgtggacacagcggtgaaaaca
gctgacacaggttacatgtctagaaaacttatcaaaggattggaagatttatcagtttac
tatgataacacagtgagagatgcaagtgcatgtattgttcaatttacatatggtggtgat
ggaagagatccttctcaaatggaaggaaaatcagggtttcctcttaatttctcaaggtta
ttggataaagccaagaatacatgtccttctggggaacataaaggcatgtctcctacagag
attcgtgaagtggttgaagaacgtctttcaatgcatgatatgactccagaaggaggctgc
tctgaagacttccggaagaaattaaaacaatttcttgaaaatattgcaacaacattggat
ttcacaatgaaagcaatcatgccacgtggacagcttaatgatgatgaatcattagttttt
gaaaatgttgctcaaagtgtatctggcatcacccctcaacagcttcaggtgttcatggaa
acttgcatctcacgttatcatcttaaaaaaattgatgctgggacaaatatcggtgcaatt
ggtgctcaaagtattggagaaccagggacacaaatgacattaaaaactttccattttgct
ggagttgctagcatgaatgtcactctcggggttcctcgtataaaggaaatcttaaatgca
gccaagaaaatcagcacacctgtcattactgcaaagcttagaacaaatgacaacgtgtca
tttgcaaaactggtgaaagggaaaatggagagaactcttttggggcaggttgcaaagagt
ataaagcttgtattgggattaagatccgcatctattgttgtttctcttgacaagaaaaca
atcgaagcactacaactcaatataaatgcttacactgttcaagattccattctaaagact
cctaaaatcaaactcaaggaaaatcatatcaggatcttggatgattataaacttgaaatt
aatcctccatatgataggaacaaatattattttgatcttcattggtacagaaacaggctt
ccatcagtcgttgtcaagggaattggtacaatcgaacgagctgtgataaacaagaaaaag
gagcaggaaaagttcaacttgcttgtagaagggacggggctccaagcagtgatgggaatg
gaagggataaatggacacgaaacaacaagcaatcacattctggaagtacaaaacacactt
gggatcgaagctgcaagaaggtcgattattaaagaaatccaatacacaatggaaagtcat
ggaatgagtatcgatatccgacatatgatgcttttagcggatgtgatgacgtataaaggt
gaagttttggggattacgaggtttgggattcagaagatgaaggaaagtgtgctgatgttg
gcgtcgtttgaaaagacatcggatcatctttttaatgcagcggttaatgggagagtggat
aagattgaaggtgtcagtgaatgtattattatggggattccaatgcttaccgggacagga
atgattaaagttaaacaaagagttccacaagtggagttgtacaagggaacggagttgatt
ttagcttga
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integrated database retrieval system
