Lactuca sativa (garden lettuce): 111890917
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Entry
111890917 CDS
T05352
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4 isoform X1
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
lsv
Lactuca sativa (garden lettuce)
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsv03016
]
111890917
Enzymes [BR:
lsv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
111890917
Transfer RNA biogenesis [BR:
lsv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111890917
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_3
Kelch_5
Kelch_1
Kelch_6
Kelch_2
Kelch_4
MTS
Methyltransf_15
PrmA
DNA_methylase
DUF6242
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
111890917
NCBI-ProteinID:
XP_023742754
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Position
7:complement(21305364..21310582)
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AA seq
1014 aa
AA seq
DB search
MEFEKRKKATLATMSSPEPDKSPKGDIDTPIIPLLKTLNSHPSYFTTSSCSGRISILSTP
TTTTTTVKKKAKGGNWVFITHEPADPNSVQNLIFPPNSTTDSLQSDNPENLVFRFEPLII
AVECKDVLSAQKLVSLAISCGFRESGITNVNSKRVIVAIRCSIRLEVPLGDTHKIMVSKE
YLTYLVGIANEKMEANRKRGDGFHDALLKNELIMRPENTVTGDYEFLNMNQDLGDKDFSM
INGGVDDFQLTKEIKDDASNDDLAGFTLPIKPMIITGEPIEKLHLWGHSAITLDTTKNPK
SVLVFGGFGGMGRHARRKDTWILDSVSGQLQLVDYGSTPSTRLGHTASLVGELMFVIGGR
GDPGNVLNDVWVLNTMNYEWMELQCNGIDFPQSHRHATAVIGSSLYVFGGIHNGNISSSM
YKLDTHTMTWEEVNVQGAKPSARHSHTMVAYNSQLFMFGGYDGVKALGDFYTFDIHSSTW
RKEKVVGSTPYARFSHTMFVYKNYIGVMGGCPIRQHYQELSIFEVDKSLWKRIKLNSIGE
DLFVRSTTSIVGDDLVIVGGGASCYAFGTKFSEPIRINLLPLLSCDTKDTRIEKISNGVL
DLNLEGIYGKKIVPLRWVLRVDKRHAKPTKDILKKFGWLDLERKVYTQESGVYVCFPITK
EFVAIYQDKKPRLNEGVDEVNDLNLQENFKVISCERALDLLVAFGGTTHADHVVKVRKAS
SSPLKVMKEVVASLLNHHNLPLTLLEELPTRWERLGDIVVLPITSFKDSIWDTLGKELWL
SVAESLGASRLARQGRVSPTGTRDSGLEILVGVNGWVDHCENGVIYSFDATKCMFSWGNL
SEKLRMGKLDCKEEVIVDLFTGIGYFTLPFLVKANAKMVYACEWNPHAIEALKHNLEANG
VADRCIVLEGDNRVTAPKGVADRVNLGLLPSSEGSWETAVRALRSNGGMMHVHGNVKDTE
EESWTQHVSKSIKEISRSQGYNWDVFVEHVERVKWYAPHIRHLVVDIRCKQIES
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgagaagagaaagaaagccaccttagccaccatgagttcgccggagccggat
aaatcaccaaaaggagacatagacacacccataatcccactcctcaaaactctcaattct
cacccatcttacttcaccaccagttcttgctccggccgcatctccatcctctcaaccccc
accaccaccacgaccaccgtcaagaaaaaagccaaaggtggcaactgggtgttcatcacc
catgaaccagctgaccctaactcggtccaaaatctcatctttcccccaaactccaccacc
gattcacttcaatccgacaacccagaaaatctagttttcagattcgaacctttgatcatc
gctgttgaatgtaaagacgttctttctgctcaaaagctagtgtctttagctatttcttgt
gggtttagggaatcagggattacaaatgtgaacagtaagcgagttattgttgcaattcga
tgttcgattagattagaagtgccattaggggatacccataagataatggtgtcaaaggag
tatttgacttaccttgttgggattgctaatgagaaaatggaagctaataggaaaagaggt
gatggttttcatgatgcattgttgaagaatgagttaatcatgcgaccagagaatactgta
accggtgattatgaatttttaaacatgaatcaagatttgggtgataaagatttctcaatg
attaatggtggagtggatgattttcaactaacaaaggaaattaaagatgacgcaagtaat
gatgatttggcagggtttactcttcctataaagccaatgattatcactggtgagccaatt
gagaagcttcatctttggggtcattcagccattacacttgacaccacaaaaaaccctaaa
tcggttcttgtttttggtggttttggaggcatgggaagacatgcacgaagaaaagacaca
tggattttagattcagtgtctggtcaactacaattggttgactatggaagcactccatcc
acacgtttgggtcacactgcttctttagtaggagagcttatgtttgttattggtggtaga
ggtgatcctgggaatgtgttaaatgatgtttgggtgcttaatacaatgaattatgaatgg
atggaattacaatgtaatggaattgactttcctcaaagtcatcggcatgcaacagcagtt
atcgggtcaagcctctatgtttttggtgggatccacaatggaaacatctcttcatcaatg
tataagcttgatacacacaccatgacttgggaagaagttaatgttcaaggggcaaaaccg
tccgctcgccattcccacacaatggtagcctacaattctcaactatttatgtttggagga
tatgatggggtaaaagcactaggagatttttacacttttgacattcattcatccacttgg
agaaaagaaaaggtggtaggaagtacaccttacgcccgattttcccacacgatgtttgtg
tataaaaactacatcggtgtcatgggagggtgtcctataagacaacattaccaagaatta
tcaatatttgaagtggataaaagtctttggaaacgtatcaagttgaattcgattggtgaa
gacctttttgttcgttccacaacaagtattgttggtgatgatcttgttattgttggtggt
ggtgcttcttgttatgcatttggaaccaagtttagtgaacccattaggatcaacttgctt
cccttactttcttgtgacacaaaagatacccgaattgaaaagatatcaaatggggttttg
gatttgaatcttgagggtatatatggaaaaaagattgttcctttacgatgggttttgcga
gttgataaaaggcatgcgaaacccacgaaggacattttgaaaaagtttggatggttggat
ttggagagaaaagtctacacacaagaaagtggagtttatgtttgcttcccaatcaccaaa
gagtttgtagcaatctaccaagataagaaaccaaggttaaatgaaggggtagatgaggta
aatgaccttaatttgcaagaaaattttaaggttatatcgtgtgaaagagctttggatctt
ttggttgcttttggtggaactacacatgctgatcatgttgtcaaagttagaaaagcttca
agttctccattgaaagtaatgaaagaagttgttgcttcgttgttgaatcatcataatctt
cctttgacactcttggaagagctacccacaagatgggagcgattaggggacattgttgtg
cttcccataacttctttcaaagactcaatatgggacactttggggaaggagctttggctg
agtgttgctgaatcacttggtgctagtcgccttgctagacaaggcagggtttcacctacg
ggaacaagagatagtggattggagattcttgttggggtcaacggatgggttgaccattgt
gaaaatggagttatttattcgtttgatgctacgaaatgcatgttttcatggggtaatctt
tcagaaaagcttagaatggggaaacttgattgtaaagaggaagttattgtagacttgttc
acaggaattggatacttcacattgcctttccttgtcaaggctaatgcaaaaatggtgtat
gcatgtgaatggaatccacatgctattgaggctttgaagcataatcttgaagcaaatggt
gtggctgatcgttgtattgttcttgaaggagataatcgtgtcacagcacctaaaggagtt
gcggatcgagtcaatcttggtctgcttccatcgagcgagggtagttgggaaactgctgta
agggcattaaggagcaatggtggcatgatgcatgtgcatggcaacgtgaaggacactgaa
gaagaatcatggacacaacacgtgtcaaaatccattaaagaaatttcaagatcccaaggt
tacaattgggatgtatttgtagaacatgtagagagagtaaaatggtatgcacctcacatt
cgtcatcttgtggtagacataagatgcaaacaaatagaatcataa
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