KEGG   Lactuca sativa (garden lettuce): 111896626
Entry
111896626         CDS       T05352                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03030  DNA replication
lsv03410  Base excision repair
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111896626
   03410 Base excision repair
    111896626
   03420 Nucleotide excision repair
    111896626
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111896626
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111896626
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111896626
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111896626
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111896626
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 111896626
NCBI-ProteinID: XP_052620592
LinkDB
Position
6:complement(57975798..57988246)
AA seq 2183 aa
MVGDNRRRRVDRKDIMISKKQKLILSAEEMLETKLGFDLFTEGEKRLGWLLTFASSSWED
QYTHKVYSCVDLYFVCQDGSTFKAKDKFRPYFYAASKDKMERDVDAYLRRRYEGKIADIQ
IVEKEDLDLKNHLSGLRKTYLKISFDTVQQLMEVKRDLMHVVERNQKKSNASEAYESIIA
GKQKEQIQDFVYCISDLREYDVPYHIRFAIDKDVRCGLWYDVSVSSDGVKLERRHDLLQR
AEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMVDGRGYLIINRECVGEDVEDLEYTPKA
EFEGYFKVTNVKNEEELIKLWFAHMKEVKPGIYVTYNGDMFDWPFMERRAAHHGLIMKDE
LGFQCDTVQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMV
RFAMEKPQMMASYSVSDAVSTYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLL
MVEAYVANVVCPNKHQSEAEKFHNGRLLESETYIGGHVECLETGVFRSDLPTSFKLDPSA
FTQLIENLDRDLQYAITVEGKMDIETVSNYEEVKDAIMEKLISLRDKPIREECPLIYHLD
VAAMYPNIILTNRLQPPSIVTEEVCTACDFNRPGKTCLRKLEWKWRGETYTAKRSDYYHL
KRQIESEVVAVDGFKSKSFLELPKVDQQLKLKDRLKKYCQKAYKRVLDKPVTERRNAGIC
MRENAFYVDTVRSFRDRRYEYKGLNKEWKGKLSEAKANGNPIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIKKANKLVEKIGKPLELDTDGIWCA
LPGSFPENFIFKFRDSKKKFTISYPCVMLNVDVARNNTNDQYQTLKDPINRTYTTHSECS
IEFEVDGPYKAMILPASKEEDKLIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSVVASVANRWLDLLDNQGNDIADSELLDYISESSTMSKSLADYGM
QKSCAVTTAKRLADFLGDTMVKDKGLLCQYVVACEPRGKDVSERAVPVAIFEADPEIMKF
YVKKWCKTSSDSGIRSIIDWEYYKKRLRFAIQKIITIPAALQKVSNPVPRVAHPPWLHKK
ISERDDKMRQTKLPFKKVNDANGKDHVHEHKVVDVEDFGSNRKSSNYTPRSIVCSYETNG
KTSSSKEKVDHGQSMNPDLEDNINRHLDYPGWLDQRKRKWKQVREKRKKQKLDNLDKNTQ
RNGVAEIHSGVSDKRQAQGRTGVNSYFERHELALTRSHWQIIQLVTSSELGQFFGWVVVD
GMMHKIPIKVPRVFYLNSKAPVTDDFPGRRVNKILPHGHHSHNLIEIIVDEDQFRGESRK
LAAHLADPEVEGIYETKIGLDFSLILQIGCVCEVDKSAKKRNVKEGWNLSELHMKTTTEC
SYLESSIPFFYLYHSISEVKGIYLVYFPSSSTIHVVLVNPFQNKDLSPYTLEKQFREACQ
ALSVKSSMSRDASSFKVEYVGSPKDAEKLLQRTISEFRDEVHGPAIGVIECPDVKLMKLS
IRALDDFPCVSIPSNARDSHYPTLAWQSFAAKIGMQRCAASPRWLNERISLSRYSHIPLG
NFELDWLIHTADIFFARALHDHQQILWVSDNGIPDLGGDYEEETCFTDEVIQPVLTYPGA
YRKVTVELKIHHLAVNALLKSNQINEMEGGTLFGFDHDLTSGSHLPNEQLGLDEATSCSS
AFRVLKQLIQRCLADAVSSGNIFADAMLQHLYRWLCSPRSKLHDPAIHRMLHKVMQKVFA
LLLYEFRKLGANIIFANFSKVILDTGKSDLSAAQAYCDSLLKALQTRDLFEWIELEPMQF
WHSFLFMDQYNYGGIQAKLDAKNSDPQVELVSSWNIAEKLPKETQDHFILIVTEFMHLPW
KFTQDEAMKRATSRNDDDSCTPSITAAAAESFESCVTEHLRDQIRSYFTDKLLKIVRDLV
LHTKGKGKSKEDEDNVYKGDPALEFIKHVCAVLVLDQNVQHDILIMRKNLLKYVRVREFA
PEAQFQDCSFSFTLPNVICSYCNDCRDLDLCRDRGLLTQEWRCGVPQCGQPYNREVMENA
LLQIVRQRERLYHLQDLVCLKCKQIKAAHLAEYCGCAGSFCLKEEVTVFMKKMEVFLNIG
VHQKFELLVECVSWILELKQVYL
NT seq 6552 nt   +upstreamnt  +downstreamnt
atggtcggcgataaccgaagaagaagagtagatcgcaaagacataatgatttccaagaaa
cagaaacttattctctcagccgaagaaatgcttgagaccaagctcggctttgatctattc
actgaaggagaaaaacgcctcggctggctactcacatttgcttcctcatcgtgggaggac
caatacactcacaaagtgtatagctgtgtcgatctttatttcgtttgtcaggatggttcg
acttttaaagccaaagacaagttcagaccttatttttatgctgcttcgaaggataagatg
gaaagggatgttgatgcatatttaagaagaagatatgaagggaaaattgctgatatccaa
atagtggagaaggaggaccttgatcttaaaaaccatctttctggattgaggaaaacttac
ttaaagatatcatttgacactgtacaacaattgatggaagtaaagcgtgacctgatgcac
gtggttgaaagaaatcaaaaaaagtctaatgcttcagaggcatatgagtccataatagca
ggcaaacaaaaagagcaaatccaagattttgtatattgtatttccgatctacgggagtat
gatgttccttaccatatccgttttgccattgataaagatgtaagatgtggattgtggtat
gatgttagtgtgtcgagtgatggagttaagttagaaaggaggcatgatcttctgcagcgt
gctgaagttcatgtttgtgcatttgacatagagaccacaaagcttccactaaagtttcca
gatgctgagtatgattcagttatgatgatctcatacatggttgatgggcgaggatatctt
attattaacagagagtgtgttggtgaagatgtagaagatttggaatatactccaaaagct
gaatttgaaggatactttaaagtgacaaacgtgaagaatgaggaagaacttatcaaatta
tggtttgctcatatgaaagaggtgaaacctggtatttatgtcacatacaatggtgacatg
tttgattggccattcatggaaagaagggcagctcatcatggcttgataatgaaggatgag
ctagggtttcaatgtgacacagtgcaaggtgaatgtcgcgctaaatttgcatgtcatctg
gattgttttgcatgggtcaaacgtgatagttatctacctcaaggaagccatggtttgaag
gctgtcactaaagccaaattgggctatgatccgttggaagtaaatcctgaagatatggtt
cgttttgcaatggaaaaaccacagatgatggcttcatattcagtatctgatgctgtgtca
acttactacttgtatatgacatatgttcaccccttcattttctcccttgcaactataata
ccaatgcctcctgatgaagtcttgcgtaaaggaagtgggaccctctgtgaaatgcttctc
atggttgaggcatacgtggcaaatgttgtatgtccaaacaagcaccaatctgaagcagaa
aagtttcataatgggcgccttttagagagtgagacatacattggtggccatgtggagtgt
ttggaaactggtgttttcagatcagaccttccaacttctttcaaacttgatccatctgct
ttcactcaacttatcgaaaacctagatcgggatcttcaatatgctattacagtggagggt
aaaatggacattgaaactgtctcaaattacgaagaagtaaaggatgctattatggaaaag
cttatatcattaagagataaacctatacgagaagaatgcccccttatttatcatctagat
gttgctgcaatgtatcccaacattatattaacaaacagacttcagccaccatcaatagtt
acagaggaagtgtgcaccgcatgtgatttcaatcgccctgggaaaacttgtcttaggaaa
cttgaatggaaatggcgtggggagacatacacagcaaagagaagtgattactatcatttg
aagaggcaaattgaatctgaggttgttgctgttgatggattcaaatcaaagtcgttcctt
gagctacctaaagtggaccaacaactgaagctgaaagatcgtttaaagaaatactgccaa
aaggcgtataaacgggtgcttgataagccagttactgaaagaagaaacgcagggatttgc
atgcgtgaaaatgcattttatgttgatactgtcagaagttttcgtgatagaagatatgaa
tacaaagggctgaataaagaatggaaagggaagttgtcagaagcaaaagctaatggaaat
cctattaagattcaggaagcacaagatatggtggttctttatgattcactacagctggcc
cataaatgtattttgaattccttctatggatatgtcatgcgcaaaggtgcaagatggtat
tcaatggaaatggctggagttgttacatatactggagcaaaaataatcaaaaaggccaat
aaacttgttgaaaaaattggaaaacctctagaattagacacagatggtatatggtgtgct
ttgccagggtcatttccggaaaactttatcttcaaatttagagactcaaagaagaagttt
acaatctcatatccgtgtgttatgctcaatgttgatgtggcaagaaacaacacaaatgac
caataccagactctcaaagatcctatcaacagaacatacacaacacacagtgaatgttca
attgaatttgaagtggatggaccatataaggcaatgattcttcctgcttctaaagaagag
gataaattgattaaaaaaaggtatgctgtttttaatgacgatggtacccttgctgaactt
aaaggttttgagataaagagaaggggtgaactaaagctcattaaagttttccaagctgag
ctatttgacaaatttcttcatgggtcaactttagaggaatgttattcagtagttgcttct
gttgcaaatcgctggcttgatcttcttgataatcaagggaatgatattgcagatagtgaa
ttgcttgattacatatcagaatcaagcacaatgagcaagtctttagcagactatggaatg
cagaaatcatgtgctgtaacaacagcaaaacgtttggctgattttcttggtgataccatg
gttaaagacaaaggacttctttgtcaatatgtcgttgcatgtgaaccaagggggaaagac
gtgagtgaacgagcagttcctgttgcaatatttgaagctgatccagaaattatgaagttc
tatgtgaaaaaatggtgcaagacctcatcagatagtggcattcgatccattattgactgg
gaatattacaaaaaacgtctcagatttgctattcaaaaaatcattacaattcctgcagca
ttgcagaaggtttcaaatcctgttccaagagtagctcatcctccatggttgcacaagaag
atttctgagagagatgacaaaatgaggcaaacaaaattaccttttaaaaaagtaaatgat
gcaaatggaaaagatcatgtacacgaacataaagttgtggatgtggaagatttcggaagc
aatagaaaatcttccaattatacccctagatctattgtttgttcttatgaaactaatggt
aaaacaagttcttccaaggaaaaagtggaccatggtcaaagcatgaatccagatttggag
gataatataaacagacatctggattatccaggatggcttgatcaaagaaaaagaaagtgg
aaacaagttcgtgaaaaaagaaagaaacagaagttagacaatttggacaaaaatacccaa
aggaatggagttgctgagatccatagtggcgtgtcagataaaagacaagctcagggtaga
acaggggtaaattcgtactttgaaagacacgaactagcccttacacgtagccactggcag
ataattcaacttgttacaagttctgaacttggacagttttttggttgggttgttgtggat
ggaatgatgcataagatccctataaaagttccaagagttttttaccttaattctaaagct
cctgtaactgatgactttcctggaagacgtgtcaacaaaattctccctcatggacaccat
tctcataacctcattgagatcattgttgatgaagatcagtttaggggagaaagcaggaaa
cttgctgctcacctagcagatcctgaagtggagggaatttacgaaacaaaaatcggtctg
gatttcagtttaattctccaaatcggatgtgtttgcgaagtggataaatcagctaaaaaa
cgaaatgtgaaagaaggttggaatctgagtgagttgcatatgaaaaccactacagaatgc
tcatacttggaatcatctattcctttcttctatttatatcatagcatatctgaagtaaag
ggaatttatcttgtatattttccttcatcttcaaccatccatgtggtattggtgaaccct
tttcagaataaagatttatcgccatatactttagagaaacagtttcgtgaagcttgccaa
gctttatcagtcaaatcttccatgtctagagatgcttccagctttaaggtggaatatgtt
ggaagccccaaagacgctgaaaagttgttacaaagaacaataagtgaatttagagatgag
gttcatggacctgcaattggtgtaatcgaatgcccagatgttaagttaatgaaattgagt
ataagagctttagatgattttccatgtgtttctattccttcaaatgctcgtgattctcac
tatccaactcttgcctggcaatcttttgctgcaaaaattgggatgcagcgttgtgctgca
tcacctcgctggttgaatgaaagaatctctctttccagatattcccatattccattaggc
aactttgaactggattggcttatacacaccgcagatatcttctttgcaagagcattacac
gatcaccaacagatactttgggtatcggataatggaattccagatcttggaggggattat
gaagaagaaacttgtttcaccgatgaggttattcaacctgttctgacttaccctggtgct
tatcggaaagtcacagttgagctaaagattcatcacctggctgtaaatgctctgttaaaa
agcaaccaaataaatgaaatggagggaggtaccttatttgggtttgaccatgatttgacc
tctggatcacatcttcccaatgaacaattagggttagatgaggccacttcatgttcatct
gcatttcgtgtcctcaaacaattgattcaaagatgccttgctgatgctgtttcatcagga
aatatatttgctgatgcgatgttgcaacatttatacagatggctctgcagtccaaggtca
aaactccatgatccagctattcatcgaatgcttcacaaggtgatgcaaaaggtgtttgca
ctactgctatatgaatttagaaaattgggcgccaatattatttttgctaatttctcaaaa
gtcatacttgacactggaaagtcagacttatctgcagcccaagcttactgtgatagttta
ctcaaagctctacaaacaagagacttatttgagtggattgagcttgaacccatgcagttt
tggcactcatttctcttcatggatcaatataactatggtggaattcaggctaaattagat
gcgaaaaatagtgatcctcaagtggagttagtctccagctggaatatagcagaaaagctc
cccaaggagactcaggatcatttcattttaatagtcactgagttcatgcacctcccatgg
aagtttacacaagatgaagctatgaaaagagcaacttcaagaaatgatgatgactcatgc
actccatccatcacagctgcagctgctgaatcatttgagtcatgtgtcactgagcatctt
agggaccagattagatcttacttcacggataaactattgaaaatagttcgtgatcttgtt
cttcacacgaaagggaaaggcaaatctaaggaagatgaagacaatgtttataaaggagat
cctgcacttgagtttattaagcatgtctgtgctgttcttgtccttgaccagaatgtgcaa
catgatattctgataatgaggaagaatctgttgaagtatgtacgtgtaagggagtttgct
ccagaggcacagtttcaagactgttccttttccttcaccttgccaaatgtcatttgcagc
tactgcaacgactgtagagacctagacttgtgtcgtgacagaggcttgctaactcaagaa
tggagatgtggggtcccacagtgtggtcaaccctacaaccgtgaagtcatggaaaatgct
cttcttcagatagttcgccagagagagagactttatcatcttcaagatttggtctgttta
aaatgcaagcaaatcaaagctgcacacctggcagaatattgtgggtgtgcgggctccttt
tgtctcaaagaggaagtcactgttttcatgaagaagatggaagtcttcttgaacatcggc
gtacaccaaaagtttgagctgcttgtcgaatgtgtgtcatggattttggagctaaaacag
gtttacttgtag

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