Lactuca sativa (garden lettuce): 111904093
Help
Entry
111904093 CDS
T05352
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv00906
Carotenoid biosynthesis
lsv01100
Metabolic pathways
lsv01110
Biosynthesis of secondary metabolites
Module
lsv_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
111904093
Enzymes [BR:
lsv01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
111904093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
Trp_halogenase
Pyr_redox
HI0933_like
FAD_oxidored
NAD_binding_8
Pyr_redox_3
FAD_binding_2
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-GeneID:
111904093
NCBI-ProteinID:
XP_042751388
LinkDB
All DBs
Position
5:complement(327344838..327346964)
Genome browser
AA seq
505 aa
AA seq
DB search
MDSLLRTHSSFEFLHAINRFAGNATTLSSSKSQIHETRFFPKKPHLKWGHGGCCVKASSS
ALLELVPEIKKELLDFELPLYDPSKGLVVDLVVVGGGPSGLAVAQQVSDAGLTVCSIDPS
PQQIWPNNYGVWVDEFEAMDLLDCLDTTWSSAVVYINENSPKNLGRPYGRVNRKQLKSKM
LKKCISNGVKFHQAKVIKVIHEELKSLLICNDGVTIQATLVLDATGFSRSLVQYDKPYNP
GYQVAYGILAEVEEHPFDVDKMLFMDWRDSHLNNNPEIKERNSKIPTFLYAMPFSSNRIF
LEETSLVARPGLKFEDIQERMVCRLKHLGIKVKSIEEDERCVIPMGGPLPVLPQRVLGIG
GTAGMVHPSTGYMVARTLAAAPIVAKSIIHYLNSEKTVSGTDLSAGIWRDLWPIERRRQR
EFFCFGMDLLLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELMTFGLSLFGRASNT
CRLDMMVNGTLPLGTMINNLVQDRE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgttgaggactcacagttcgttcgaatttctccacgcaatcaacagattt
gcaggaaacgcaaccactttgagttcatccaagtctcaaattcacgaaactagatttttc
cctaagaaaccccatttgaaatggggtcatggaggttgttgtgttaaggccagtagtagt
gctcttctagaactcgttcccgaaatcaagaaagaactcctcgatttcgagcttcctctc
tacgatccttcaaagggtctcgtggtggatcttgtggtggtcggcggtggcccgtcgggc
cttgcggttgcccaacaagtttccgatgccgggctcaccgtttgctcgattgacccttca
cctcaacagatatggcccaacaattatggtgtttgggtcgatgaatttgaggccatggat
ttgctagattgcctcgacaccacctggtcaagcgccgttgtttacatcaacgaaaattca
cccaagaatctcggtagaccttacggaagagttaaccggaaacaactcaaatcaaagatg
ttaaagaaatgtatatcaaatggagtcaagtttcatcaagcgaaggtaatcaaagtcatt
catgaagaacttaaatctttgttaatctgcaacgatggtgtcaccattcaagcgacatta
gtcctcgatgcaactggtttttcaagatctttggttcaatacgacaagccttacaatcca
ggataccaagtcgcatatgggattctagcagaagtagaagaacacccttttgatgttgac
aaaatgctcttcatggattggagagattcacatctcaacaacaatcccgaaatcaaagaa
cggaattcaaaaatcccaactttcctttacgcgatgccgttttcatcaaatcggatcttt
cttgaagaaacttcactcgtggctcgaccagggttaaaatttgaagatattcaagaacga
atggtgtgtaggttaaagcatttgggtataaaagtgaaaagcatcgaagaagatgaacgg
tgtgttattccgatgggtgggccgctcccggtcctccctcaaagagttcttggaataggc
ggcaccgccggtatggtgcatccttccaccggatacatggtggctagaaccctagctgcc
gccccgattgttgcaaaatcgataattcattatcttaattctgaaaaaacggtgtcgggg
acggatttatctgctgggatttggcgggatttgtggccaattgagcggagaagacaaaga
gagtttttctgttttggtatggatctcttgcttaagcttgatttggaagggacaagaagg
ttttttgatgcgttttttgatcttgaacctcgttattggcatgggtttttgtcatcacga
ttgtttctgcctgagttaatgacttttgggctttctcttttcggtcgtgcttctaatact
tgtagattagacatgatggtgaatggaactttaccattgggaacgatgatcaacaacttg
gttcaagatcgagaatag
DBGET
integrated database retrieval system
