Lactuca sativa (garden lettuce): 111904556
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Entry
111904556 CDS
T05352
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111904556
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsv01009
]
111904556
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsv03019
]
111904556
03036 Chromosome and associated proteins [BR:
lsv03036
]
111904556
Protein phosphatases and associated proteins [BR:
lsv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
111904556
Messenger RNA biogenesis [BR:
lsv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
111904556
Chromosome and associated proteins [BR:
lsv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
111904556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Htt_N-HEAT_1
Vac14_Fab1_bd
PDS5
HEAT_EZ
RTP1_C1
Adaptin_N
CLASP_N
SCD
Cnd1
Motif
Other DBs
NCBI-GeneID:
111904556
NCBI-ProteinID:
XP_023756078
LinkDB
All DBs
Position
3:81754407..81758099
Genome browser
AA seq
587 aa
AA seq
DB search
MSMGDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVDHANVLLPPLETLCTVEETCVREKAVESLCRIGSQMKDT
NLVEFFVPLVKRLAAGEWFTARVSACGLFHIAYPSAPEALKAELRSVYSQLCQDDMPMVR
RSAATNLGKFAATMEPSHLKTEIMQIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTKSELVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILNAELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKEATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLGSQLGVGFFDDKLGALCMKWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIVPQV
LEMVNNPHYLYRMTVIRAISLLAPVMGSEITCSKLLPVVVTASKDRVPNIKFNVAKVLQS
LIPIVDHSVVESTIKPCLVDLSEDPDVDVRYFANQAIQALNHDMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgggagatgaacctctgtacccaatagcagtgttaatagatgaactgaagaac
gatgacatccaattgcgattaaattccattagaagactatcaacaattgcacgtgctcta
ggggaagaacgcacacgaaaggaactaatccctttcttgagtgaaaacaatgatgatgat
gatgaagttcttcttgcaatggcagaagagttaggtgtcttcattccctatgtaggagga
gttgatcatgccaatgtcttactcccccctctcgaaaccctctgcactgttgaagaaacc
tgtgtgagggagaaagctgttgagtcactttgcagaattggatcacagatgaaagacacc
aatctggttgagttctttgtacctctggttaagaggttggcagctggtgaatggtttact
gcacgtgtttctgcttgtgggctatttcacattgcttaccctagtgcccctgaagcattg
aaggctgaattaaggtctgtatatagtcagttgtgtcaagatgatatgcctatggttaga
agatctgctgctacaaatttggggaaatttgctgctactatggaaccttctcatctcaag
actgaaatcatgcaaatatttgaggatcttacacaagatgatcaagattctgtacgattg
ctagctgttgagggatgtgctgctcttgggaaattgctagagccacaagactgtgttgca
catattcttcctgtcattgtcaatttttctcaggacaagtcatggcgtgtgaggtatatg
gtagctaaccaattatacgaactatgtgaagctgtgggacccgaacccaccaagtctgaa
ttggttccagcttatgtaagattacttcgagacaacgaagctgaagtacgaatcgcagct
gctggaaaagtcaccaaattctctcgaatcctaaacgcagaacttgcgatccaacatatt
cttccatgcgtcaaggaattatcatccgattcttctcaacatgttagatccgctctcgcc
tcagttatcatgggcatggcccctgttttaggaaaagaagcgacaatcgaacaacttctt
cctatatttctttcgcttctaaaagacgagttcccagatgtacgtctcaatatcataagt
aagctggatcaagtcaatcaggttattggaatcgatcttttgtctcaatcattacttcca
gcaattgtcgagctagcagaagacagacattggagggtccgattggcaataatagaatat
atccctcttttgggtagtcaattaggtgtagggttttttgatgataagcttggtgctctc
tgcatgaaatggttgcaggacaaggtttactccattagagatgctgctgctaacaactta
aaacgcctcgcagaggaatttggtcccgaatgggcaatgcaacacattgttccacaggta
ttggaaatggttaacaacccacattatttgtaccgaatgactgttattcgtgcaatttcc
cttcttgcccctgtcatgggctcagaaatcacttgttctaaattgcttcctgttgttgta
actgcctccaaagacagagtgccgaatatcaaattcaatgtagcaaaggtgttgcaatcg
ctaattcccattgttgaccactctgttgtggagagtacgattaagccgtgtttggtggat
ttgtctgaggatccagatgttgatgttcgttattttgcaaatcaagcaattcaggcattg
aatcatgacatgatgtcaagctaa
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