Lactuca sativa (garden lettuce): 111905005
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Entry
111905005 CDS
T05352
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111905005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111905005
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111905005
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111905005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111905005
NCBI-ProteinID:
XP_023756456
LinkDB
All DBs
Position
7:50041571..50053195
Genome browser
AA seq
1147 aa
AA seq
DB search
MGVIEDSVTLDASQGMSKVDRQFLAAPVKSAVDKFQLLPEFLKVRGLVKEHLDSFNYFVN
TEIKKIVRANDLVKTKVTDKVFLRYTDVWIGTPSVVVDGVTDVLTPQRCRLGDMTYSAPI
YVNIEYCNDIYGYNANLQKKTKVIIGRMPIMLKSNKCVLYGKDEDELAKVGECPLDPGGY
FVVKGNEKVILIQEQLSKNRIIIDTDKKGCIQASVVSSTATTKSKTTIVMEKEKIYLILN
SFTSKVPIMAVMKAMGMESDQEVVQMLGRDPQYAALLLPSIEDCANQGIYTREQALEFLE
KRHKKRYGKGTEDEGALGVLRDIFIAMVRVRDNNFHPKCVYVVVMLRRMMDALLNKHSMD
DKDYIGNKRFELSGQLISLLFEDLFKTMNTSITLHLDKNLDKISPSSKFDISKCIVKEDI
TNGLERSLSTGNWNVKRFNMDRTGVTQIVSRLSFIAAYGYMTKISPQFEKSRKVSGPRAL
QPSQWGMLCPCDTPEGEQCGLVKNLALMTHVTTDEEEGPIIALCSCLGVEDLSQLSGEEL
HSLSSYLIILNGLILGKHRKPQFFANAMRKLRRTGKIADFVSVYVNEKQRCVYIASDGGR
VCRPLVIADNGVSRIKHHHMKELKDGVRNFDSFLQEGLIEYLDVNEENNALIALYEGEAT
SETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYL
LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV
MKRHTAAFQKYQNTFDQINIPSRAPHDREKNQILDNDGLASPGEIIRHQDVYFTKLIPEN
TNVSLKSQPTNNKGRPYRQTYKGAEGEAAVVDRVALCSDQRGNLCVKFMVRHTRRPEVGD
KFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSC
GKFHYGSAFGEPSGHAHKVEDISETLVKHGFCYNGKDFLYSGITGMPLQAYIFMGPIYYQ
KLKHMVMDKMHARGMGPRQLISRQPTEGRSNNGGLRVGEMERDCLIAYGASNLIYERLMI
SSDPFEVQVCRKCGLLGYENRKTKTKVCSTCKNGDNLSSMKLPYACKLLFQEIQSMNIVP
KLSLADS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgatcgaagactctgttactttggatgcgagtcaaggtatgagcaaagttgac
aggcaattccttgctgctcctgtgaagtctgctgttgataagtttcagctacttcctgag
tttcttaaggtgaggggattggtgaaggaacatttggactctttcaattattttgtcaat
actgaaataaagaagattgttcgtgctaatgaccttgtgaaaactaaagtaactgataag
gtctttctcagatatacagatgtttggattggaacgccttctgtggttgtggatggtgtt
actgatgtactgactcctcaaaggtgtcggctgggtgacatgacgtattctgctccaata
tatgtaaacattgagtattgcaatgatatttatggttataatgccaatctacaaaaaaaa
acaaaagttattataggaagaatgcctatcatgttaaagagcaataagtgtgtcctttat
ggtaaagatgaagatgaacttgcaaaagtaggtgaatgcccacttgatccaggtggatat
tttgttgttaaaggaaatgaaaaggttattttaattcaagaacaactttcaaagaacagg
ataatcatagacacagataagaagggttgcatccaggcatctgttgtgagcagcacagca
acaacaaagagtaaaacaactatagtaatggagaaagagaaaatatatttgattttgaat
tcttttacttccaaggttcccattatggcagttatgaaagctatgggtatggaaagtgat
caggaagttgtgcagatgcttggtagagatcctcaatatgctgctctgcttttgccatct
attgaggattgtgcaaatcagggtatttatacacgagaacaagctttggaatttcttgaa
aaaaggcataagaagagatatggtaagggtactgaggatgagggagctttgggtgttctt
cgggatatttttattgccatggttcgggtgagagataataattttcatcctaaatgtgta
tatgttgtggtgatgttgagacgcatgatggatgcacttttaaacaagcattccatggat
gacaaagattatataggcaacaaaagatttgagctttcggggcaattgatatctctacta
tttgaggacttattcaagacaatgaatacctctataactttgcatttagataaaaaccta
gacaagatcagtccttctagcaagtttgatatatctaagtgtatagtgaaagaggatatt
actaatggcttggagcgcagcctctctactggaaattggaatgttaagcgatttaatatg
gacagaacaggcgtaacacagattgtttcaaggctgtccttcattgcagcatatggatac
atgacaaaaatctcaccacagtttgaaaagtcaaggaaagtcagtggacctagggccttg
caacctagccagtggggaatgctttgcccatgtgacactcctgaaggtgaacagtgtggg
ttggtgaaaaatctggctttgatgactcatgttacaaccgatgaagaggaaggccctatt
atcgccttgtgctcctgtttgggagttgaagacttgtctcaactttctggagaagaactt
cattcactgagttcatatctcatcatattaaatggtcttatccttggaaagcataggaag
ccacagttctttgctaatgcaatgaggaaactgagaaggacgggtaaaatagctgatttt
gtaagcgtttatgtcaatgagaaacaacgttgtgtttatattgcttcggatggtggccgt
gtttgtcggccacttgtgattgctgacaatggtgtttcaaggattaagcatcatcacatg
aaagagttgaaggatggagttcgcaatttcgatagctttcttcaggaaggattgatagag
tatcttgatgtcaatgaagagaacaatgctttgattgctttatatgaaggagaagctacc
agtgagacaacacatattgaaatagaaccattcacaatcttaggtgtttgtgctgggctc
attccttttcctcatcataaccagtccccaagaaatacctatcagtgtgccatgggaaag
caagcaatgggtaatattgcatataaccagctatgtcggatggatactttgatctacctt
ttggtttatcctcaacgcccactattgacaacaagaacaattgagctggttgggtatgat
aagctaggagctggacaaaatgcaactgttgcagttatgagttatagtggttatgatatt
gaagatgccattgttatgaataaatcatccttggatcgtggttttggtcgctgtattgta
atgaaaagacacacagctgcctttcagaaatatcagaatacatttgatcagattaatata
cctagccgggccccacatgatcgagaaaagaatcagattttggataatgatggacttgct
tctcctggtgaaataataagacatcaagacgtttacttcacgaaattaatccctgaaaat
acaaatgtttctctcaagtcacagccaacaaataataaaggtagaccatatagacaaacc
tacaaaggtgcagaaggggaagcagctgttgtggatagagtggctttatgctctgatcag
cgtggcaatttatgtgttaaattcatggttcgccatactcgtaggcctgaggttggtgac
aagtttagtagtaggcatgggcagaaaggtgtttgtgggaccattatccaacaagaagat
tttcctttctctgaacgaggcatatgcccagatttgattatgaaccctcatggctttcca
agtcgaatgactgttggaaagatgatagagcttcttggaagtaaggctggagtttcatgt
gggaagtttcattatggaagtgcatttggtgaaccaagtggtcatgcacacaaagttgaa
gatataagtgaaacccttgtgaagcatggattttgttacaacgggaaggattttctatat
tcaggaatcactggtatgccactacaagcatatattttcatgggaccaatatactaccag
aaactaaagcacatggtcatggataagatgcatgctcgaggcatgggcccacgtcaactc
ataagtagacaacccacagaagggagaagcaacaatggaggtttgagagtgggagaaatg
gaacgagattgtttgattgcttatggagctagtaatctgatatatgaacgtttaatgatc
tctagtgatccctttgaggttcaggtttgtagaaagtgtgggttactagggtacgaaaat
cgtaagacaaaaactaaagtatgctccacatgcaaaaatggagataacctctcatccatg
aaactaccatatgcttgcaagcttttattccaggaaatccagtcgatgaatatagttcca
aaattgtcattggccgactcatga
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