Lactuca sativa (garden lettuce): 111905952
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Entry
111905952 CDS
T05352
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111905952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsv03021
]
111905952
Enzymes [BR:
lsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111905952
Transcription machinery [BR:
lsv03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
111905952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
111905952
NCBI-ProteinID:
XP_052621902
LinkDB
All DBs
Position
7:complement(15723738..15738556)
Genome browser
AA seq
1162 aa
AA seq
DB search
MREVDRQFLAAPVKSAVDKFQLLPEFLKVRGLVKEHLDSFNYFVNTEIKKIVRANDLVKS
RLDDKVYLRYRDVWIGTPSVVVDGVTDEMSPQKCRLGDMTYSAPIYVNIEYCNGNHGQNT
HPLFKREVIIGRMPIMLKSSKCVLYGKDEDELAKVGECPLDPGGYFVVKGNEKVILIQEQ
LSKNRIIIDTDKKGCIQASIMSSTAMTKSKTVIVMEKEKIYLSLNSFTSKVPIMVVMKAM
GMESDQEVVQMLGRDPQYAALLLPSIEDCANHGIYTQEQALEFLEKKHKKNKFGKDEGAL
GVLRNIFIAIVRVRDNNFHPKCVYVVVMLRRMMDALLNKDSMDDKDYIGNKRLELSGQLI
SILFEDLFKTLNTNLAKLVDSILNKSSRSSRFDISQHLMKDDITNGLERSLSTGNWNVQR
FKMDRKGITQIVSRLSFIAAYGYMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
QCGLVKNLALMTHVTTDEEEGPIITLCSCLGVEDLSQLSGEELHSPSSYLIILNGLILGK
HRKPQFFANAMRKLRRAGKIADFVSVYVNEKQRCVYIASDGGRVCRPLVIADKGVSRIKH
HHMKELKDGVRNFDSFLQEGLIEYLDVNEENNALIALYEGEATSETTHIEIEPFTILGVC
AGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLAYPQRPLLTTRTIELV
GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYLXHDPYYLLSIIC
LTVVCCXICFLLCICLNRHTAAFQKYQNSCDKFSPPSRAPHDREKNQILDNDGLASPGEI
IRHQDIFFTKLCPENANVSISSHPSNTKYRPNRQTYKGAEGEAAVVDRVALCSDKRNNLC
VKFMIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTV
GKMIELLGSKAGVSCGKFHYGSAFGEPSGHAHKVEDISETLVKHGFCYNGKDFLYSGITG
MPLQAYIFMGPIYYQKLKHMVMDKMHARGMGPRQLITRQPTEGRSKNGGLRVGEMERDCL
IAYGASNLIYERLMISSDPFEVQVCRKCGLLGYENHKTKAKVCSTCKNGDNISSMKLPYA
CKLLFQEIQSMNIVPKLTLSDS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagttgacaggcaattccttgctgctcctgtaaagtctgctgttgataagttt
cagctacttcccgagtttctcaaggtgaggggattagtgaaggaacatttggactccttt
aattattttgtcaatactgaaataaagaagattgttcgtgctaatgaccttgtgaaaagt
agattggatgataaggtctatctcagatatagagatgtttggattggaacaccttctgtg
gttgttgatggtgttaccgatgaaatgagtcctcaaaagtgtcggctaggtgacatgacg
tattcggctccaatatatgtgaacattgagtattgcaatggcaatcatggtcaaaatacc
catccactgtttaaaagagaagttattataggtagaatgcctatcatgttaaagagtagt
aaatgtgtcctttatgggaaagatgaagatgaacttgcaaaagtaggtgaatgcccactt
gacccgggcggatattttgttgtgaaaggaaatgaaaaggttattttaattcaagaacaa
ctttcaaagaacaggataatcatagacacagataagaagggttgcatccaggcatctatt
atgagcagcacagcaatgacaaagagtaaaacagttatagtaatggagaaagagaaaata
tatttgagtttgaattcttttacttccaaggttcccatcatggtggttatgaaagctatg
ggtatggaaagtgatcaggaagttgtgcaaatgcttggtagagatcctcaatatgctgct
ctgcttttgccatctattgaggattgtgcaaatcatggtatttatacacaagaacaagct
ttggaatttcttgaaaaaaagcataagaagaacaagtttggtaaggatgagggagctttg
ggtgttcttcggaatatctttattgccatagttcgggtgcgagataataattttcatcca
aaatgcgtatatgttgtggtgatgttgagacgcatgatggatgcacttttaaacaaggat
tccatggatgacaaagattatataggcaataagcgacttgagctttcggggcaattaata
tcaatattatttgaggacctgttcaagacactgaataccaatttagctaagcttgtagat
tcaatcctaaacaagagcagtcgttctagcaggtttgatatatctcagcatctaatgaaa
gatgatattactaatggcttggagcgcagcctctctactggaaattggaacgttcagcga
tttaagatggacagaaaaggcataacacagattgtttcaaggctgtccttcattgcagca
tatggatacatgacaaaaatttcaccacagtttgaaaagtcaaggaaagtcagtggacct
agggccttacaacctagccagtggggaatgctttgcccatgtgacactcctgaaggtgaa
caatgtggattggtgaaaaatttggctttgatgacccatgttacaactgatgaagaggaa
ggccctattattaccttgtgttcctgcttgggagttgaagacttgtctcaactttctgga
gaagaacttcattcaccaagttcatatctcatcatattaaatggtcttatccttggaaag
cataggaagccacagttctttgctaatgcaatgaggaaactgagaagggcgggtaaaata
gctgattttgtaagcgtttatgtcaatgagaaacaacgttgtgtttatatcgcttcagat
ggtgggcgtgtttgtcggccacttgttattgctgacaaaggtgtttcaagaattaagcat
catcacatgaaagagttgaaggatggagttcgcaatttcgatagctttctacaggaagga
ttgatagagtatcttgatgtcaatgaagagaacaatgctttgattgctttatatgaagga
gaagctacgagtgagacaacacatattgaaatagaacctttcacaatcttaggtgtttgt
gctgggctcattccttttcctcatcataaccagtccccaagaaatacctatcagtgtgcc
atgggaaagcaagcaatgggtaatattgcatataaccagctatgtcggatggatactttg
atctacctattggcttatcctcaacgaccactattgacaactcgaacaattgagctggtt
gggtatgataagcttggagctggacaaaatgcaactgttgcagttatgagttatagtggt
tatgacattgaagatgccattgttatgaataaatcatccttggatcgtggttttggtcgt
tgtattgtaatgaaaaggtacttataacatgatccatattatctattatctattatctgt
ttgactgttgtctgttgttaaatttgctttctcttatgcatttgcctaaacaggcacaca
gctgcctttcagaaatatcagaattcatgtgataagttttctccacccagtcgggcccca
catgatcgagaaaagaatcagattttggataatgatgggcttgcttctcctggtgaaata
ataagacatcaagacatttttttcacgaaattatgccctgaaaatgcaaatgtttcaatc
agttcacatccttcaaatactaaatatagaccaaatagacaaacctacaaaggtgcagaa
ggggaagctgctgttgtggatagagtggctttatgctctgataagcgtaacaatttatgt
gttaagttcatgattcgccatactcgtaggcccgaggttggtgacaaatttagtagtagg
catgggcagaaaggtgtttgtgggaccattatccaacaagaagattttcctttctctgaa
cgaggcatatgcccagatttgattatgaaccctcatggctttccaagtcgaatgactgtt
ggaaagatgattgagcttcttggaagtaaggctggagtttcttgtggaaagtttcattat
ggaagtgcatttggtgaaccaagtggtcatgcacacaaagttgaagatataagtgaaacc
cttgtgaagcatggattttgttacaatgggaaggactttctgtattcaggaatcactggt
atgccactacaagcatatattttcatgggaccaatatactaccagaagctaaagcacatg
gtcatggataagatgcatgctcgaggcatgggcccacgtcaactcataactagacagccc
acagaagggagaagcaaaaatggaggtctgcgagtgggagaaatggaaagagattgtttg
attgcttatggagctagtaatctgatatatgaacgtttaatgatttctagtgatcccttt
gaggttcaggtttgtagaaagtgtggattactagggtacgaaaatcataagacaaaagct
aaagtttgttccacatgcaaaaatggagataatatctcatccatgaaattaccatatgct
tgcaagcttttattccaggaaatccagtcgatgaatatagttccaaaattgacattgagc
gattcatga
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integrated database retrieval system
