Lactuca sativa (garden lettuce): 111915140
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Entry
111915140 CDS
T05352
Name
(RefSeq) ABC transporter D family member 1 isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
lsv
Lactuca sativa (garden lettuce)
Pathway
lsv02010
ABC transporters
lsv04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lsv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111915140
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
111915140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lsv02000
]
111915140
Enzymes [BR:
lsv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
111915140
Transporters [BR:
lsv02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
111915140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
AAA_22
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
111915140
NCBI-ProteinID:
XP_023766585
LinkDB
All DBs
Position
8:1188997..1199680
Genome browser
AA seq
1335 aa
AA seq
DB search
MTSLQLLQLTERGRSLLSSGRRKTLLLATGIIVAGGTAAYMHSQSRVRRPSETNGLGDDH
ENERGSRNKSVIKKSRQKKGLKSLQVLAAILLSHMGKMGAKDLLALLATVMLRTAVSNRL
AKVQGFLFRAAFLRRVPTFVQLIIENITLCFVQSALYSTSKYITGTLSLRFRKILTKLIH
AQYFQNMIYYKMSHVDGRITNPEQRIASDVPKFCSELSDLIQEDLTAVTDGLLYSWRLCS
YASPKYIVWILAYVLGAGATIRNFSPAFGKLMSTEQQLEGEYRQLHSRLRTHAESIAFYG
GETREESHIQHKFKALVNHLKLVQHDHWWFGMVQDFLLKYLGATVAVILIIEPFFSGTLR
PDTSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNRLSGYADRIHELMAISRELS
PKDVPSLQRRGSRNYITQADYIEFDGVKVVTPSGNVLVEDLTLKVESGSNLLITGPNGSG
KSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTSDQEV
EPLTHSEMVDLLKNVDLEYLLNRYPPEKEINWGEELSLGEQQRLGMARLFYHKPRFAILD
ECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWRVNHKREDSL
ADAGFPKLKSSETERQNDAMAVQLAFSNTRNDSTFSSSKSQSYFSELIAASPSEEISTLL
PVVPQLQNDPRVLPLRIAAMFKVLVPTVLDKQGAQLLAVAVLVVSRTWISDRIASLNGTT
VKYVLEQDKAAFVRLIGVSVLQSAASSFVAPSLRHLTARLALGWRIRLTSHLLKNYLRKN
AYYKVFHMSGDSIDADQRITQDLEKLSTDLSGLVTGMVKPSVDILWFTWRMKMLTGRRGV
AILYAYMLLGLGFLRSVTPDFGDLGNREQELEGSFRFMHERLRTHAESVAFFGGGAREKA
MIESRFNELLAHAKILLRKKWLFGVLDDFVTKQLPHNVTWGLSLLYAMEHKADRSLTSTQ
AGELAHALRFLASVVSQSFLAFGDILELHRKFIELSGGVNRIFELEELLDAAQSDENAGT
SSKSNEESEDVISFSEVDIITPTQKLLARKLTCEIVPGKSLLLTGPNGSGKSSVFRALRG
LWPIVDGRLVKPCHDVNDVAEAESGCGTGILYIPQKPYTCLGTLRDQIIYPLSHEQAEKR
ALSLCQQGQIDVGVADANILDMHLKRILENVKLLYLFEREGRWDASQNWEDILSLGEQQR
LGMARLFFHKPRFGVLDECTNATSVDVEEHLYRLACDMGITVITSSQRPALIPFHSMELR
LIDGEGKWELRSIKH
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgacttctctgcagctattacagttgacggagcggggtcgtagcctgctttcgtcaggt
cgcaggaaaactctattgctggcaactggcattatagttgctggtgggactgctgcatac
atgcattcacagagcagggttagaaggcccagtgaaactaatggattgggagatgatcat
gaaaatgaacgagggagcaggaataagagtgttataaaaaaaagtaggcaaaagaaagga
ctgaaatcactccaggttttagctgcaattctgttatcccatatgggcaaaatgggtgca
aaggaccttttagctcttctggccacagtgatgttacgaactgctgtgagcaatagatta
gcaaaagtccaaggattcctgtttcgtgctgcttttcttcggcgcgtgccgacctttgtt
cagttgatcattgaaaacattaccttatgttttgttcaatcagctttgtattctacatcc
aagtacataacagggaccttaagcttgcggtttagaaagatactcacaaagcttattcat
gcacagtattttcagaatatgatatactacaaaatgtcccatgttgatggaaggataact
aatcctgagcaaagaatcgcaagtgatgtaccaaagttctgttcagaattgagtgatctt
atacaggaagatcttactgcagttactgatggcctgctgtattcctggcgcctctgttct
tatgcaagccccaaatatatagtttggatattggcttacgtgttaggagcaggagcgact
atcagaaacttctctcctgcatttggtaaattgatgtctacagagcaacaacttgaaggc
gagtatagacaacttcactcaaggctgaggactcatgcagaaagcatagcattttatggt
ggtgaaactagagaggaatcccatatccagcacaagttcaaggcacttgtcaatcatttg
aaacttgtccagcatgaccattggtggtttggcatggttcaagatttcttattgaagtat
cttggtgctactgttgctgtgatcctaatcatagagcctttcttttctggcactttgagg
cccgacacctcaacattaggacgtgcagagatgttgagcaatctcagatatcatacgagt
gtcattatatcgctatttcagtcattgggaactctctccattagttccagacgcctcaat
cgcctaagtgggtatgcggatcgcattcatgaacttatggctatatctcgagagttaagt
ccaaaagatgtaccatctttacagagaagagggagtaggaattatataactcaggcagac
tacatagagtttgatggagtcaaggtggttactccaagtggtaatgtcctggtggaagac
ttgactttgaaggtcgaatcaggatctaaccttttaatcacaggaccaaatggtagtggg
aaaagctcgctgttccgagtgttgggagggctgtggcctttggtgtctggacatattgta
aaacctggggttggttccgatctgaataaagagatcttttatgtaccccaaagaccatat
acagctgtagggacgctacgtgaccagttgatctatcctctgacctctgatcaagaagtt
gaacctctgacccacagcgaaatggttgacctgttaaaaaatgttgaccttgagtatttg
ctaaatcgttacccacctgaaaaagagattaactggggggaggagttgtctctcggagag
caacagagattgggaatggcgaggcttttctatcacaaacccagatttgcaattcttgat
gaatgcaccagtgctgtgacaactgatatggaagaacgcttctgtgctaaagtccgagct
atgggaacatcatgcatcactatttctcatcgacctgctctcgttgcatttcatgatgtt
gttctatccttggatggggaagggggttggagagttaaccacaaaagggaggactcactt
gctgatgccggctttcctaaattgaagtcatctgaaacagaacgtcagaatgatgccatg
gcagttcaacttgcattctcaaatacaagaaatgattctactttttctagttccaagtct
cagtcatatttttcagagttaatagctgcgtctccatctgaggaaatcagtaccttgttg
ccggtcgtcccacaattgcaaaatgatccccgcgtactgcctttaagaatagcagccatg
tttaaagtactggtgcccacagtacttgacaagcagggagcacaacttcttgctgttgct
gttcttgtagtctcaagaacttggatttcagatcgtatagcttctctaaatggaacaact
gtgaagtacgttttggagcaagataaagcagcctttgtacggttaattggtgttagtgtc
cttcagagcgctgcttcttcatttgttgcaccttctttgaggcacttgactgccaggctt
gcacttggatggaggatacgcctgacttcacacttactgaaaaattacttgaggaagaac
gcatattacaaggtatttcacatgtcaggagatagcattgatgcagatcagagaataaca
caagatttggaaaagttgagcacagatttgtcagggctggtaaccggaatggtaaagcca
tctgttgatattttatggttcacatggagaatgaagatgctaacaggtcggcgtggtgtt
gctatactatatgcatatatgttgctagggttaggctttctaaggagtgtcactcctgat
tttggtgacctgggaaatcgggaacaagaacttgaagggagctttaggttcatgcacgag
aggctgcgtacacatgctgaatctgttgctttctttggaggtggtgctcgagaaaaagcg
atgattgagtcaagatttaatgagcttcttgctcatgctaaaatacttctgaggaagaaa
tggttatttggagtactggatgactttgtcaccaaacaactaccccacaatgttacctgg
ggattgagcttgttatatgctatggagcacaaagctgatcgttcgttgacttccactcaa
gcaggtgagcttgcacatgcattgcggtttttggcatcagttgtatctcaaagcttcttg
gcctttggtgacatcttggagctgcatagaaagttcattgaactgtctggtggtgttaat
cggatttttgaacttgaggaacttcttgatgctgcacaatctgatgaaaatgctggtact
tcatcaaagtccaatgaggaatctgaggatgttatctctttttcggaggttgatattatc
acgccaacacagaagttattagccagaaagttgacttgcgagatagtaccagggaaaagc
cttcttcttaccggtccgaatgggagtggtaaaagttcggtgttcagggctctgcgaggt
ctttggcctatagtggatggacgacttgttaaaccatgccatgatgttaatgatgttgct
gaggctgaatctggttgtggcactggtattttatatattcctcaaaagccgtatacttgt
ttaggaacattacgtgatcaaatcatctatcccctttcacacgagcaagccgaaaagagg
gcattaagtttgtgtcaacaagggcaaatagacgttggtgttgctgatgcaaatattctg
gatatgcatttaaaaaggattctagagaatgtgaaattgttgtacctttttgaaagagaa
gggaggtgggatgctagtcagaactgggaagacatcttgtctcttggtgaacagcagaga
ttaggcatggctcgcttattctttcataagcctcggtttggcgtcctagatgaatgcacc
aatgctacaagtgtggacgttgaagagcacctctatcgacttgcatgtgacatgggcatc
acagttattacatcttcacagcgtcctgcattaataccattccactccatggaattacgc
ttgattgacggtgaaggcaagtgggagcttcgctcaatcaaacattaa
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