Ligilactobacillus saerimneri: GTO87_01305
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Entry
GTO87_01305 CDS
T08336
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GTO87_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsw03021
]
GTO87_01305
03400 DNA repair and recombination proteins [BR:
lsw03400
]
GTO87_01305
Transcription machinery [BR:
lsw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GTO87_01305
DNA repair and recombination proteins [BR:
lsw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GTO87_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QLL77380
UniProt:
A0A7H9EI54
LinkDB
All DBs
Position
278958..279542
Genome browser
AA seq
194 aa
AA seq
DB search
MGLEKFADMNKDELSMIEVAHEILQEHGDTLEFADLTNKVQQFMGKSDEDIRERLTQFYT
DLNVDGSFISLGDNMWGLRKWYPYDSIDEALVHTDDDDEGSSSKKHKRVNAFLADVDDDD
DDVIDYNDDDPEDTDLDSGYDDDDEENNELKQYSSDLDDFGDDEEDDDLPDGIEGQLSEL
QDDDDEEEDEDQLN
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttgggacttgaaaaattcgctgatatgaataaagatgagctgtcaatgatcgaagtcgct
catgaaattttgcaagaacacggggatacattggaattcgctgatttaacaaataaggtg
cagcagttcatgggcaagtctgatgaagatattcgtgaacgcttgacccagttctatact
gacttgaatgttgacggcagtttcatttccctgggtgataacatgtggggcttgcggaag
tggtatccatatgattccatcgatgaagctctcgttcataccgatgatgacgatgaaggt
tcttcaagcaagaaacacaagcgtgtcaatgcgttcttagctgatgttgacgatgacgac
gatgatgtgatcgactacaacgatgatgatccagaagatacagatcttgattccggctac
gacgatgatgacgaagaaaacaacgaattgaagcaatacagtagtgacttagatgacttt
ggtgatgatgaagaagacgatgacttaccagatggcatcgaaggacaattatcagaattg
caagacgatgatgacgaagaagaggacgaagaccaattaaactaa
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