Ligilactobacillus saerimneri: GTO87_05990
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Entry
GTO87_05990 CDS
T08336
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
lsw
Ligilactobacillus saerimneri
Pathway
lsw00190
Oxidative phosphorylation
lsw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsw00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GTO87_05990
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GTO87_05990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsw03019
]
GTO87_05990
Enzymes [BR:
lsw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GTO87_05990
Messenger RNA biogenesis [BR:
lsw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GTO87_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QLL78191
UniProt:
A0A7H9EKV6
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All DBs
Position
1157551..1159683
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AA seq
710 aa
AA seq
DB search
MKVKNKFLNPDFFINRELSWIDFNGRVLEEARDPENPLLERANFLGITQSNVDEFFMVRV
ASLNKLKTAHVEKKDAAGLTVTEQIEAINQKEHHMVARRYTTYNRSLIPLLAKQGIKIVS
VRDLNDGQYEALRRYFNDEVYPVLTPMADDSSRPFPFIANNSLNIAVRLHLPTSTEAKYA
IIRIPQLFKRLIRVVNEPNTFVLIEDIIKEFIPLLFAGYTIDETTTFRVIRDMDLDVAER
DTSDLLLAVQEQLKEREHGSVVRLEIEKQTSSALARRLITNLKVSSQAIYYINGPIDLTF
LKKLGREVNGHADLRFTPFTPYQVPELDEHHDIFAEIRRRDFLVQHPYDSFNSVINLIKQ
AAFDPQVLAIKMTLYRVSGNSPIIKYLGQAAQQGKQVTVLVEVKARFDEKNNVRWAKKLE
EMGCHVIYGLVGLKTHSKTILIIRKEHDGIRRYMHFGTGNYNDVTAHFYTDIGLFTCNNE
MGIDSTNLFNTLSGFSQPPYYHRLHLSPKNIRKFIGHKIDNEIAYAQAGDPALIRMKMNS
LSDPHIIAKLYEAAAAGVKIELIVRGICCLRNDIPECKNNITVHSIVGRLLEHSRIYYFS
NGGKEEIYFASADMMKRNLDRRVEILYPVLEDDLQQRGIAIFDTLWRDNVKARNLVGTQF
KRIDRRGITSFNAQEFFISEAKRKKRQIRKESKRRNKKASHFIPLLNDQN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaaaataaatttttaaaccctgatttttttattaaccgcgaattaagttgg
atcgacttcaacggccgggtgctcgaagaagcccgtgaccccgaaaaccccttactcgaa
cgggcaaactttcttggcattacccaaagcaacgtcgatgaatttttcatggtccgggtt
gcctcccttaacaagttaaaaaccgcccatgtcgaaaaaaaggatgctgctggcctaact
gttaccgagcaaattgaagcgattaaccaaaaggagcaccacatggtggcgcggcgttat
accacttataaccgctcgcttatccccttactagctaaacaaggaattaaaatcgtttct
gttcgggatttaaacgacggtcaatatgaagccttacggcgttattttaacgatgaggtt
tatccagtattaaccccaatggctgatgattcttcccggcccttccctttcatcgctaat
aattcgctcaatattgcggtccgcctccacctccctaccagtactgaggctaaatatgcg
atcattcgaattccccagctgttcaagcgcttgattcgggtagtcaatgaacctaatact
tttgttctaattgaggatatcattaaggaatttatccccctcctctttgctggctatacg
atcgatgaaaccacaactttccgggtaattcgggacatggaccttgatgtagccgaacgg
gatacttcggacttgttgctggcggtgcaagaacagctcaaggagcgggaacacggcagt
gtggtccggctggaaattgaaaagcaaactagttccgcattggcgcggcgcctaatcact
aatcttaaagttagttctcaggccatttattacatcaatggtccaattgacctgactttc
ttgaaaaagttagggcgggaagtcaacggccacgctgatttgcgcttcacaccgtttacc
ccttatcaggttccagaactagatgaacaccatgatatttttgctgaaatcagacgacgc
gacttcttggttcagcacccttatgactcctttaatagtgtcatcaatcttatcaagcaa
gccgcctttgacccgcaagttttagccatcaaaatgactctttaccgggtatcgggaaat
tcaccaattatcaaatacctaggccaagctgcacagcaaggtaagcaagtaaccgtcttg
gtggaagtcaaagcccggttcgatgaaaagaataatgttcgttgggccaaaaagctagaa
gagatgggctgtcacgtaatatatggtcttgtcgggttaaagacccactccaagaccatc
cttattatccgtaaagagcatgatggtattcggcgatatatgcactttggcacagggaac
tacaatgacgtcacggctcacttctacactgatattggtctttttacttgcaataacgaa
atggggattgattcgactaacttatttaatacactctcaggcttttcacaaccgccatac
tatcaccgcctccatctttcacccaaaaatattcgcaagtttattggtcacaagatcgac
aatgaaattgcctatgcgcaagcaggcgatcccgcattgattcggatgaagatgaattcc
ctttctgatccgcatattattgccaagctttatgaagcggcagcggccggggtcaaaatc
gaattgatagtccggggaatttgttgtctccgcaatgatattccagaatgcaaaaataat
atcaccgtacactctatcgtcggtcgcttactcgaacatagtcgaatctactacttctct
aacgggggtaaagaagaaatatactttgccagtgctgatatgatgaagcggaacttggac
cgccgggtcgaaattctgtatcctgtactagaagacgacttgcagcaacgggggatcgct
atttttgataccttgtggcgggataatgtcaaagcacggaacttagttggcacgcaattc
aagcggatcgatcgccgcgggataacatcgtttaatgcccaggagttctttatcagcgaa
gcaaaacgaaagaagcggcaaattcgtaaagaaagtaaacgacgtaacaaaaaagcgtca
catttcattccgttattaaacgaccaaaattaa
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