Lachancea thermotolerans: KLTH0D11594g
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Entry
KLTH0D11594g CDS
T01117
Name
(RefSeq) KLTH0D11594p
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLTH0D11594g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0D11594g
Enzymes [BR:
lth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
KLTH0D11594g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
KLTH0D11594g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
nSTAND3
Roc
PduV-EutP
AAA_7
Septin
ABC_tran
AAA_24
Sigma54_activat
AAA_28
Motif
Other DBs
NCBI-GeneID:
8295454
NCBI-ProteinID:
XP_002553214
UniProt:
C5DF21
LinkDB
All DBs
Position
D:complement(949719..951041)
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AA seq
440 aa
AA seq
DB search
MASLPGLNDSLHPADLGVDLNEPKHVSITAGSEWRVDVPQESKLTIKVHSGVAEIFGTEL
ASDVPYVFQGTKFAVYAVEDAEFEWTSPELTSHSISSDTNMKFIYNVHFALEKLRVSSFE
GPRVLIVGESCTGKTSLAKTLCAYAIKFKAHQPMMVNLNPQECIYSPPGCLTATPISDVI
DVSSSTWGQSMTSGATKLHNKQPIVKSFGLEQISENKERYVSTFQQLANAVRGRVQNDST
VRRSGLIIDTPPLGQLSDDFSELKEIIYQFKVNAVVVCAKDDTLALKLNEHLPVETLAIV
RLPTSSGVVQTDDVYKRALQRNAIREYFYGDFNTVLSPYTIGVDSDMITVWQPKSVLVQS
DSQDDLLPVEINASNLQHALVAISYASRRSSSEEVSASPILGFALIMDVNDTKRKLRVLL
PVPGLLPDKAMILTAYRYLE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcttcctggcttgaatgactccctgcacccggcggacttgggtgttgacttg
aatgaacccaaacatgtctctatcacagcaggttctgagtggagagttgatgtccctcag
gaatctaaattaactataaaagtgcactcaggcgtagcagagatatttggaaccgagctt
gcttctgatgttccctatgtgtttcagggtacgaagttcgctgtttatgctgtggaggac
gctgagttcgaatggacctctccagaattgacaagccactcgatctctagcgatactaac
atgaagtttatctataacgtacattttgcgctagagaaactgagagtttctagcttcgaa
ggaccccgtgtgctaattgttggcgagtcatgcacgggcaaaaccagtttggctaagacg
ctatgcgcatacgccattaagttcaaagcgcatcagcctatgatggtcaacttgaaccct
caggaatgcatttactctcctccagggtgcttgaccgctacacctatatctgatgtcata
gatgttagctctagtacatggggccaaagcatgaccagcggcgccactaagctgcacaat
aagcagcctatagtaaagagctttgggctggagcaaatatcggaaaacaaagagcgatat
gttagcaccttccagcagctagcaaatgcggtccgaggtagagttcaaaatgactcaacg
gttcgccgctctggtttgatcattgatacacctccacttggtcaactatcggacgatttc
agtgagctcaaagaaattatttatcaattcaaagtgaatgcagtggtagtttgcgcaaaa
gatgacacacttgctttgaaactaaatgagcatttgcctgtagagaccctggctatagtc
aggcttccgacatccagtggtgttgtacagaccgacgatgtttacaagagggcacttcag
cgcaatgctatcagagaatacttttatggagatttcaacactgtgctgagtccttacact
ataggggttgactctgacatgatcacggtatggcaaccaaagagcgttttggtgcaaagt
gattcacaagacgaccttttaccagttgaaatcaatgctagcaacctgcagcatgctttg
gtcgccatctcgtatgcatccagaagatcttcaagcgaagaagtctcggcaagtcccatt
ttaggttttgctttaataatggatgttaatgataccaagagaaaacttagagtacttcta
cccgtccctggtttgcttcctgataaagcaatgattctaactgcatatagatatttagag
taa
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