KEGG   Lachancea thermotolerans: KLTH0G15598g
Entry
KLTH0G15598g      CDS       T01117                                 
Name
(RefSeq) KLTH0G15598p
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
lth  Lachancea thermotolerans
Pathway
lth03020  RNA polymerase
lth03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLTH0G15598g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0G15598g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lth03021]
    KLTH0G15598g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0G15598g
Transcription machinery [BR:lth03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     KLTH0G15598g
  RNA polymerase III system
   RNA polymerase III
     KLTH0G15598g
  RNA polymerase I system
   RNA polymerase I
     KLTH0G15598g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLTH0G15598g
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Sof1 SH3_2 Mrr_cat
Other DBs
NCBI-GeneID: 8293997
NCBI-ProteinID: XP_002555711
UniProt: C5DNB3
LinkDB
Position
G:complement(1362363..1363010)
AA seq 215 aa
MDQENERNVSRLWRAFKTVKEMVRDRGYFITQEEVDLSLEDFKAKYCDSMGRPQRKMMSF
QSNPVEEALEKFPNMGSLWVEFCDEASVGIKTMKNFVIHISEKNFQTGIFVYQNGVTPSA
MKLLPSVAPATIETFHEASLVVNITHHELVPKHIKLSDEEKKELLRRYRLKESQLPRIQR
MDPVALYLGLKRGDVVKIIRKSETSGRYASYRVCL
NT seq 648 nt   +upstreamnt  +downstreamnt
atggaccaagagaacgaaagaaatgtttccaggctatggagagctttcaaaactgtaaaa
gaaatggtgagagatcgtggctatttcatcacgcaagaagaagttgatttgtcgctcgaa
gatttcaaggccaaatattgcgactctatgggtcgtccacagcgtaagatgatgtccttc
cagtccaatcctgtagaagaagccttagaaaaattcccaaacatgggctctctgtgggtt
gagttctgcgatgaggcctccgtaggcatcaagacgatgaagaactttgtcattcacatc
agcgaaaagaacttccagacaggtatttttgtttaccaaaatggtgtgacacccagcgcc
atgaagctgcttccatcggttgcgccagctacaattgagacattccacgaggcgtctcta
gttgtgaacattacccaccacgagcttgtccccaagcacatcaagctgagtgatgaggag
aagaaggagctactcagaaggtacagactcaaagagtctcagctacctagaatacagagg
atggacccagttgcattatatctcggcctaaaaagaggcgatgtggttaaaatcattagg
aagagtgagacctccggacgttacgcaagttacagagtgtgtttgtaa

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